Gene Information

Name : kdpB (BMA10229_A0783)
Accession : YP_001026773.1
Strain :
Genome accession: NC_008836
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : 3.6.3.12
Position : 803107 - 805194 bp
Length : 2088 bp
Strand : -
Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions

DNA sequence :
ATGACTCAACATTCCGCTACGCGATCGATGTTCGACCCGGCGCTCGTGCGCCCGGCGATCGTCGATTCGTTCAAGAAACT
CACGCCGCGCACGCAGTTGCGCAACCCGGTGATGTTCTGCGTGTACGTCGGCAGCATCCTGGCGACGATCCTTTGGATCG
CCGCGCTGACGGGGCAGGCCGAGGCGCCCGCGGGCTTCATTCTCGCGGTCGCGCTGTGGCTGTGGTTCACGGTGCTGTTC
GCGAACTTCGCCGAGGCGATCGCCGAGGGGCGCTCGAAGGCGCAGGCCGCGTCGCTTCGCAGCGCGAAGAAGGACGTGAT
GGCCAAGAAGCTCAACGAGCCGCATCCGAAGTCGCCCGTGCGCATCATGACGGCGTCCGATCTGCGCCGCGGCGACGTCG
TGCTCGTCGAGGCGGGCGATACGATTCCGGCCGACGGCGAGGTGATCGAGGGCGTCGCGTCGGTCGACGAATCGGCGATC
ACCGGCGAATCCGCGCCGGTGATCCGCGAATCGGGCGGCGATTTTTCGTCGGTGACGGGCGGCACGCGCGTGCTGTCGGA
CTGGATCGTCGTCAAGGTGACGGCGAACCCCGGCGAGGCGTTCCTCGACCGGATGATCGCGATGGTCGAAGGCGCGAAGC
GCAAGAAGACGCCCAACGAGATCGCGCTCACGATCCTGCTCGTCGCGCTGACGATCGTGATGCTGCTCGCCACCGCGACG
CTGCTGCCGTTCTCGATGTTCTCGGTCGACGCGATGCACTCGGGCCACGTCGTGACGATCACCGCGCTCGTCGCGCTGCT
CGTGTGCCTGATCCCGACGACGATCGGCGGCCTGCTGTCCGCGATCGGCGTGGCCGGCATGAGCCGGATGATGCAGGCGA
ACGTGATCGCGACATCGGGCCGCGCGGTGGAGGCCGCGGGCGACGTCGACGTGCTGCTGCTCGACAAGACGGGCACGATC
ACGCTCGGCAACCGGCAGGCGTCGGCGTTCCTGCCCGCGCCCGAGGTGACCGAGGCGACGCTCGCCGACGCCGCGCAACT
GTCGTCGCTCGCCGACGAAACGCCGGGGGGCCGCAGCATCGTCGTGCTCGCGAAGGAGCGCTTCAACATTCGCCAGCGCG
ACATGGGCGCGCTGCACGCGGTGTTCCTGTCGTTCTCCGCGCACACGCGCATGAGCGGCGTCGACCTCTCGCCCGAGCGC
GAGATCAGAAAGGGCGCGGCCGACGCGGTGAAGAAGTACGTCGAGAGCCACGGCGGACGCTTTCCGGCCGAGGTGACGAA
CGCGGTGACGGACGTCGCGCGGCGCGGCAGCACGCCGCTCGTGGTCGCCGAGAAGCGGGGGGCGCTCGCGCGCGTGCTCG
GCGTGATCGAGCTGAAGGACATCGTGAAGGGCGGCATCAAGGAGCGTTTCGCGGAGCTGCGCAAGATGGGCATCAAGACC
GTGATGGTGACGGGCGACAACCGGCTCACGGCCGCGGCGATCGCGGCGGAAGCGGGCGTCGACGATTTCCTCGCGGAAGC
GACGCCCGAGACGAAGCTCTCGACGATTCGCGAGCACCAGGCGGCGGGCCGGCTCGTCGCGATGACGGGCGACGGCACCA
ACGACGCGCCGGCGCTCGCGCAGGCGGATGTGGCCGTCGCGATGAACACCGGCACGCAGGCCGCGAAGGAGGCGGGCAAC
ATGGTCGACCTCGATTCGAATCCGACCAAGCTGATCGAGATCGTCGAGATCGGCAAGCAGATGCTGATGACGCGCGGCTC
GCTCACGACGTTCTCGATCGCGAACGACATCGCGAAGTACTTCGCGATCATTCCGGCCGCGTTCGCGACCACCTATCCGC
AGCTGAACGCGCTGAACGTGATGCATCTGGCCACGCCCGCCTCCGCGATCATGTCGGCCGTGATCTTCAATGCGCTCATC
ATCGTGCTGCTGATTCCGCTCGCGCTCAAGGGCGTGAAGTATCGTCCGCTCGGCGCCGCGACGCTGCTGCGCCGCAATCT
GCTCGTCTACGGCCTGGGCGGCATTCTCGTGCCGTTCGTCGGCATCAAGCTGATCGACGTCGTGCTCGCCGCGCTCGGCT
GGGTTTAA

Protein sequence :
MTQHSATRSMFDPALVRPAIVDSFKKLTPRTQLRNPVMFCVYVGSILATILWIAALTGQAEAPAGFILAVALWLWFTVLF
ANFAEAIAEGRSKAQAASLRSAKKDVMAKKLNEPHPKSPVRIMTASDLRRGDVVLVEAGDTIPADGEVIEGVASVDESAI
TGESAPVIRESGGDFSSVTGGTRVLSDWIVVKVTANPGEAFLDRMIAMVEGAKRKKTPNEIALTILLVALTIVMLLATAT
LLPFSMFSVDAMHSGHVVTITALVALLVCLIPTTIGGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVLLLDKTGTI
TLGNRQASAFLPAPEVTEATLADAAQLSSLADETPGGRSIVVLAKERFNIRQRDMGALHAVFLSFSAHTRMSGVDLSPER
EIRKGAADAVKKYVESHGGRFPAEVTNAVTDVARRGSTPLVVAEKRGALARVLGVIELKDIVKGGIKERFAELRKMGIKT
VMVTGDNRLTAAAIAAEAGVDDFLAEATPETKLSTIREHQAAGRLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGN
MVDLDSNPTKLIEIVEIGKQMLMTRGSLTTFSIANDIAKYFAIIPAAFATTYPQLNALNVMHLATPASAIMSAVIFNALI
IVLLIPLALKGVKYRPLGAATLLRRNLLVYGLGGILVPFVGIKLIDVVLAALGWV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 4e-165 64
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 6e-165 64
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-135 56
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-135 56
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-135 56
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-135 56
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 1e-135 56
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 5e-135 56