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Name : BMA10229_A2261 (BMA10229_A2261) Accession : YP_001028225.1 Strain : Genome accession: NC_008836 Putative virulence/resistance : Unknown Product : portal protein PBSX family Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 2289993 - 2291084 bp Length : 1092 bp Strand : + Note : identified by match to protein family HMM PF04860; match to protein family HMM TIGR01540 DNA sequence : TTGTCGTCGTGGCGCCGCCGCGCGTCGACGACGGCGCCTTCCGCGTGCTCGAACGTCACCAGTTCCGCGGCAACGACTTT GAGGAACAGGCCGCGCCAAATCCGAGCGCCGGCGCGTGCCGAGGTCTTCACGTTCGACGATCCGACGCCCGTCATGAACC GGGCCGAGATTCTCGATTACGTCGAGTGCTGGTCGAACGGCGAATGGTTCGAGCCGCCGGTCAGCTTCGCCGGCCTGGCA AAATCGTTTCGCGCGAGCACGCACCATAGCTCGGCGCTGTTCTTCAAGGCGAACGTGCTGGCGTCGACATTCCGCCCGCA CCGCTGGCTGTCGCGGCACGCGTTCGAGCGATGGGCGCTCGATTTCCTGACGTTCGGCAACGGCTATCTGGAACGCCGCC GCAACATGGTCGGCGGCACGCTGCGGCTCGAGCCCGCGCTCGCGAAGTACGTACGGCGCAAGGCCGATTTCAGCGGCTTC GTGTACGTGAACGGCTGGCAGGACCGGCACGAGTTCGCGCCCGACAGCGTGTTCCAGCTCGTGCGGCCGGACATCAATCA GGAGGTCTATGGCCTGCCTGAGTATCTGAGCTCGCTGCACTCGGCGTGGCTGAACGAATCGTCGACGTTGTTCCGGCGCA AGTATTACGAGAACGGCAGCCACGCCGGCTTCATCCTGTACATGACCGACGCCGCGCAGAAGCAGGACGACGTGGACAAC ATGCGCGACGCGCTGAAGAACGCGAAGGGGCCGGGCAATTTCCGCAACGTGTTCATGTACGCGCCGGGCGGGAAGAAGGA CGGCATCCAGCTCATTCCCGTGTCCGAGGTCGCCGCGAAGGACGAGTTCTTCAACATCAAGAACGTGACGCGCGATGACC TGCTCGCCGCGCACCGCGTGCCGCCGCAGTTGCTCGGCATCGTGCCGAGCAATTCGGGCGGGTTCGGCACGCCGGATACC GCCGCGCGCGTGTTCGGGCGCAATGAAATCAGGCCGCTACAGGCGCGCTTCGCCGAGCTGAACGACTGGCTCGGCGACGA GGTCGTGACGTTCGACGATTACGAGATTCCGCCGGCGCCGGTCGCGGCGTAG Protein sequence : MSSWRRRASTTAPSACSNVTSSAATTLRNRPRQIRAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLA KSFRASTHHSSALFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFSGF VYVNGWQDRHEFAPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDN MRDALKNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDT AARVFGRNEIRPLQARFAELNDWLGDEVVTFDDYEIPPAPVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 2e-103 | 62 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 2e-103 | 62 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 8e-92 | 60 |
