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Name : BMA10229_A1812 (BMA10229_A1812) Accession : YP_001027789.1 Strain : Genome accession: NC_008836 Putative virulence/resistance : Unknown Product : PBSX family phage portal protein Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 1855360 - 1856415 bp Length : 1056 bp Strand : + Note : identified by match to protein family HMM PF04860; match to protein family HMM TIGR01540 DNA sequence : ATGAGCAAGCGCCGATCGCGCGCGCCGCGCACGTTCGCGGCCGCGCCCAATCCGAGCGCCGGCAGCGCCGCGCCGGCGCG TGCCGAGGTCTTCACGTTCGACGAACCGACGCCCGTCATGAACCGGGCCGAGATTCTCGATTACGTCGAGTGCTGGTCGA ACGGCGAATGGTTCGAGCCGCCGGTCAGCTTCGCCGGCCTGGCGAAATCGTTTCGCGCGAGCACGCACCATAGCTCGGCG CTGTTCTTCAAGGCGAACGTGCTGGCGTCGACGTTCCGCCCGCACCGCTGGCTGTCGCGGCACGCGTTCGAGCGGTGGGC GCTCGATTTCCTGACGTTCGGCAACGGCTATCTGGAACGCCGCCGCAACATGGTCGGCGGCACGCTGCGGCTCGAGCCCG CGCTCGCGAAGTACGTACGGCGCAAGGCCGATTTCAGCGGCTTCGTGTACGTGAACGGCTGGCAGGAGCGGCACGAGTTC GAGCCCGACAGCGTGTTCCAGCTCGTGCGGCCGGACATCAATCAGGAGGTCTATGGCCTGCCCGAGTATCTGAGCTCGCT GCACTCGGCGTGGCTGAACGAATCGTCGACGCTGTTCCGGCGCAAGTATTACGAGAACGGCAGCCACGCCGGCTTCATCC TGTACATGACCGACGCCGCGCAGAAGCAGGACGACGTGGACAACATGCGCGACGCGCTGAAGAACGCGAAGGGGCCGGGC AACTTCCGCAACGTGTTCATGTACGCGCCGGGCGGGAAGAAGGACGGCATCCAGCTCATTCCCGTGTCCGAGGTCGCCGC GAAGGACGAGTTCTTCAACATCAAGAACGTGACGCGCGATGACCTGCTCGCCGCACACCGCGTGCCGCCGCAGTTGCTTG GCATCGTGCCGAGCAATTCGGGCGGGTTCGGCACGCCGGACACCGCCGCGCGCGTGTTCGGGCGCAACGAAATCAGGCCG CTACAGGCGCGCTTCGCCGAGCTGAACGACTGGCTCGGCGAGGAGGTCGTGAGGTTCGACGATTACGAGATTCCGCCGGC GCCGGTCGCGGCGTAG Protein sequence : MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDEPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA LFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFSGFVYVNGWQERHEF EPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPG NFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRP LQARFAELNDWLGEEVVRFDDYEIPPAPVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 5e-102 | 62 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 5e-102 | 62 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 5e-90 | 60 |
