Gene Information

Name : BMA10229_A0152 (BMA10229_A0152)
Accession : YP_001026158.1
Strain :
Genome accession: NC_008836
Putative virulence/resistance : Unknown
Product : IS407A, transposase OrfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 156591 - 157313 bp
Length : 723 bp
Strand : -
Note : identified by match to protein family HMM PF00665

DNA sequence :
GTGCTCGCGGCGCGTCTGGTGAAGTTGGCGCACGAACGTCGTCGATTCGGCTACCGCCGACTGCACGCCCTGGTGGAACG
CGAAGGCACGCACGCCAATCACAAGCGCATCTATCGCCTGTACCGTGAGGCAGGGCTGGCTGTGCGGCGCCGTCGCAAGC
GCCACGGCGTCATGATTGAGCGCGAGCAACTGGCATTGCCGGGCGCACCCAACGAGGTATGGTCAATCGATTTCGTGATG
GATGCGCTTTCCAACGGCCGGCGCGTGAAGTGCCTGACCGTCGTCGACGATTTCACGAAAGAGGCTGTCGACATCGTCGT
CGACCATGGCATCTCAGGTTTGTATGTCGCTCGGGCATTGGACCGTGCAGCTCGCTTCCGTGGCTATCCCAAGGCGGTGC
GAACAGACCAGGGACCCGAATTTACGAGCCGCGCGCTTGACCAGTGGGCGTATGCGAACGGCGTCACGCTGAAGTTGATT
CAGGCGGGCAAGCCCACGCAGAATGCGTACATCGAATCGTTCAACGGCAAGTTCCGCGACGAATGCCTTAACGAGCACTG
GTTCACGACGCTCGCGCACGCTCGGGCAGTCATCGCGGCATGGCGTCAGGACTACAACGAGCAAAGGCCGCACAGCGCAC
TGAACTACCTTGCGCCGTCAGAGTTTGCGGCGAAACATCGGGCAACCGCGGACGCTCCTGCCGCTTTCCAGGAGTTGGTT
TAA

Protein sequence :
MLAARLVKLAHERRRFGYRRLHALVEREGTHANHKRIYRLYREAGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVM
DALSNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRAARFRGYPKAVRTDQGPEFTSRALDQWAYANGVTLKLI
QAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQDYNEQRPHSALNYLAPSEFAAKHRATADAPAAFQELV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 2e-73 75
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 3e-84 75
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 2e-54 66
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 2e-39 46
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 7e-42 44