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Name : BMA10229_A1311 (BMA10229_A1311) Accession : YP_001027294.1 Strain : Genome accession: NC_008836 Putative virulence/resistance : Virulence Product : type II/IV secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1335713 - 1336936 bp Length : 1224 bp Strand : + Note : identified by match to protein family HMM PF00437 DNA sequence : GTGCGGTCCGCAGCATCCGCGCTGCCCCGGCCGCGCGCGCCCGAGCTCGCCGACGACGCACCCGCGGTCGGTATCGTCGC CGACATGCTGCGCGCGGCCCACGAGCGCGATGCTTCCGACATCCATGTCGAGCCCTGTGAATCCGGCTGGCGCGTGCGTC TGCGCATCGACGGCGTGCTGCACGAGTTCGCGCGGCCGCCCGCTCATTTGCGCGACGCATGCGTGACGCGCATCAAGGTA CTCGCGCGGATGGACATCGCCGAGCGCCGCGTGCCGCAGGACGGCCGGCTGCGGCTCCCGCTCGCGCCGGGGCGCGCGGG CGACTACCGCGTGAGCTCGCTGCCGACGCTGCATGGCGAGAAACTCGTGCTGCGGCGTCTGGAGACGCTGCCCGCCGATC TGTCGCTCGCCGCGCTCGGCTTCGACGCGGCTCAGGCACGCGGCGTCGAGGCGGCGATCGGCGCGCCGCACGGTCTCATC CTCGTCACGGGGCCGACGGGCAGCGGCAAGACGCTGTCACTGTATTGCTTCCTGCAAATGCTGAACGACGTGTCGCGCAA CGTCTGCACGGTCGAGGATCCGGCCGAGATCGAGCTCGACGGCATCAACCAGGTCGGCGTGCGCGAGAAGGCGGGCCTCA CCTTCGCGGTCGCGCTGCGCGCGTTCCTGCGGCAGGATCCCGACGTCATCATGGTCGGCGAGATACGCGATGCGCAGACC GCCGACGTCGCGCTGAAAGCCGCGCAGACCGGGCACCTCGTGCTGTCGACGCTGCACACGAATGACGCGCCCGCCGCGGT AGCCCGCCTGCTCGACATCGGCGTCGCGCCGTACAACCTCGCCGCCGCGCTGCGGCTCGTGACAACGCAGCGGCTCGTGC GACGCCTGTGCCCCGCTTGCCGCGCGCCGTCGGACGCGTCGCCCGCCACACTGCGCGCCGCGGGATTCGACGCCGCGTCG ATCGACGCCGGCTGGCGCCCGTATGCCGCGAACGGATGCGCCGCATGCCATGGAATCGGTTATCGGGGGCGCATCGGCAT CCATCAGGTGATGCCGCTGTCCGCCGAGTTGCGCAACCTGACCGTCGCGCGCGCGGGCAGCGCCGAACTCGCGCGACAAG CGCGCGCCGAAGGCATGGCGAGCCTGCGCGATGCGGCACTCGCCCGCGTTCGCGACGGCACGACGAGCTTGAGCGAAGCG CTCGCCACGACGGAGGCGGCATGA Protein sequence : MRSAASALPRPRAPELADDAPAVGIVADMLRAAHERDASDIHVEPCESGWRVRLRIDGVLHEFARPPAHLRDACVTRIKV LARMDIAERRVPQDGRLRLPLAPGRAGDYRVSSLPTLHGEKLVLRRLETLPADLSLAALGFDAAQARGVEAAIGAPHGLI LVTGPTGSGKTLSLYCFLQMLNDVSRNVCTVEDPAEIELDGINQVGVREKAGLTFAVALRAFLRQDPDVIMVGEIRDAQT ADVALKAAQTGHLVLSTLHTNDAPAAVARLLDIGVAPYNLAAALRLVTTQRLVRRLCPACRAPSDASPATLRAAGFDAAS IDAGWRPYAANGCAACHGIGYRGRIGIHQVMPLSAELRNLTVARAGSAELARQARAEGMASLRDAALARVRDGTTSLSEA LATTEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-68 | 49 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-68 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BMA10229_A1311 | YP_001027294.1 | type II/IV secretion system protein | VFG2426 | Protein | 2e-164 | 99 |
| BMA10229_A1311 | YP_001027294.1 | type II/IV secretion system protein | VFG2048 | Protein | 4e-69 | 49 |
| BMA10229_A1311 | YP_001027294.1 | type II/IV secretion system protein | VFG0233 | Protein | 3e-83 | 49 |
| BMA10229_A1311 | YP_001027294.1 | type II/IV secretion system protein | VFG0182 | Protein | 6e-67 | 48 |
| BMA10229_A1311 | YP_001027294.1 | type II/IV secretion system protein | VFG1876 | Protein | 1e-62 | 44 |
