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Name : gabD (BMA10229_2125) Accession : YP_001025920.1 Strain : Genome accession: NC_008835 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 2172635 - 2174104 bp Length : 1470 bp Strand : - Note : identified by match to protein family HMM PF00171; match to protein family HMM TIGR01780 DNA sequence : ATGACTACAGCTCACGAAACCCTTGCACTGAAAGATCCCGCGCTGTTGCGCGAGCGCGCGTTCGTCGCGGGCGAATGGCA GGCCGCCGACGGCGGCGCGACGCTCGAGGTCCGCAACCCGGCGACGGGCGCGCTGATCGGCACGGTGCCCGCGATGGGCG CGGCCGAGACGCGCCGCGCGATCGACGCGGCGAACGCCGCGTGGCCCGCCTGGCGCAAGAAGACCGCGAAGGAGCGCGCG GCGATCCTGCGCAAGTGGCACGATCTGATGATCGCGCACGCGGACGATCTCGCGCTGATCCTGACGACCGAGCAGGGCAA GCCGCTCGCCGAGGCAAAGGGCGAGATCGGCTATGCGGCGTCGTTCCTCGAATGGTTCGCCGAGGAAGGCAAGCGCGTGT ACGGCGATACGATCCCGACGCCCGCCGCCGACAAGCGGATCGTCGTGACGAAGGAGCCGGTGGGCGTGTGCGCGGCGATC ACGCCGTGGAACTTCCCGGCGGCGATGATCACGCGCAAGGTCGGCCCGGCGCTCGCGGCCGGTTGCCCGATCGTCGTGAA GCCGGCCGAGGCCACGCCGTTCTCGGCGCTCGCGATGGCGGTGCTCGCCGAGCGCGCGGGCGTGCCGGCCGGCGTGTTCA GCGTCGTCACGGGCGAGCCGAAGGCGATCGGCGGCGAACTCACGTCGAACCCGATCGTGCGCAAGCTGTCGTTCACCGGC TCGACGCCGGTCGGACGCCTGCTGATGGCGCAATGCGCGGCGACGGTCAAGAAGGTGTCGCTCGAGCTCGGCGGCAACGC GCCGTTCATCGTGTTCGACGACGCGGATCTCGATGCGGCCGTCGAGGGCGCGATCGCATCGAAGTACCGCAACAGCGGGC AGACCTGCGTCTGCACGAACCGCTTCTACGTGCACGAGAAGGTCTACGACGCGTTCGCCGAGAAGCTGACCGCGGCCGTC GCGAAGCTGAAGGTCGGGCCCGGCACCGAGGCCGGCGTCGTGCAGGGCCCGCTCATCAACGGCGCGGCGGTGCGCAAGGT CGAAGCGCACATCGCCGACGCGCTCGACAAGGGCGCGCGCGTGACGACGGGCGGCCAGCGCCACCCGCTCGGCCACGGCT TCTTCGAGCCGACCGTGCTGACGGGCGTCACGCCCGACATGAAGGTCGCGAAGGAGGAAACGTTCGGCCCGCTCGCGCCG CTGTTCAGGTTCTCGACCGAGGAAGAAGCGATCCGCTACGCGAACGACACCGAGTTCGGCCTCGCCGCGTACTTCTACAG CCGCGACATCGGCCGCGTGTGGCGCGTGGCCGAGGCGCTCGAATACGGGATGGTCGGCATCAACGCCGGAATCATCTCGA ACGAGGTCGCGCCGTTCGGCGGCGTCAAGCAATCGGGCCTCGGCCGCGAGGGCTCGCACTACGGGATCGACGATTACGTC GTGATCAAGTACATGTGCGTCGCGGTGTGA Protein sequence : MTTAHETLALKDPALLRERAFVAGEWQAADGGATLEVRNPATGALIGTVPAMGAAETRRAIDAANAAWPAWRKKTAKERA AILRKWHDLMIAHADDLALILTTEQGKPLAEAKGEIGYAASFLEWFAEEGKRVYGDTIPTPAADKRIVVTKEPVGVCAAI TPWNFPAAMITRKVGPALAAGCPIVVKPAEATPFSALAMAVLAERAGVPAGVFSVVTGEPKAIGGELTSNPIVRKLSFTG STPVGRLLMAQCAATVKKVSLELGGNAPFIVFDDADLDAAVEGAIASKYRNSGQTCVCTNRFYVHEKVYDAFAEKLTAAV AKLKVGPGTEAGVVQGPLINGAAVRKVEAHIADALDKGARVTTGGQRHPLGHGFFEPTVLTGVTPDMKVAKEETFGPLAP LFRFSTEEEAIRYANDTEFGLAAYFYSRDIGRVWRVAEALEYGMVGINAGIISNEVAPFGGVKQSGLGREGSHYGIDDYV VIKYMCVAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 9e-151 | 68 |
