Gene Information

Name : Mpe_A0623 (Mpe_A0623)
Accession : YP_001019820.1
Strain : Methylibium petroleiphilum PM1
Genome accession: NC_008825
Putative virulence/resistance : Virulence
Product : ABC-type polysaccharide/polyol phosphate transport system ATPase component-like protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 658138 - 658998 bp
Length : 861 bp
Strand : -
Note : -

DNA sequence :
ATGATCGAACTGCAGTCCGTCACCAAGTCGTACCCGACACCGCACGGGCGTCGCTATGTCTTCCGCGACCTCAGCTTCAC
CTTCCCCGAGAACGCCAGCATCGGCCTGATCGGCCCCAATGGTGCTGGCAAATCCACGCTGATGCGCCTGCTCGGCGGCA
TTGACTCGCCCGACCACGGCGTGGTGCGCAGCGACCGACGCATCTCCTGGCCGGTCGGCTTGGCGGGCGGCTTCCAGGGC
GCGCTGACCGGCCGCGACAACGTGCGCTTCGTCTGCCGCGTCTACGGCGCCACGGGCAGCGCCATGCGCGCAAAGGTCCG
CTTCACCGAGGAGTTCGCCGAGATCGGCGAGTATTTCGACCTGCCGGTGCGCTCGTATTCGTCGGGGATGCGCTCACGGC
TGGCGTTCGGGCTCAGCATGGCTTTCGATTTCGACTATTACCTGATCGACGAGGTCATGGCGGTCGGCGACGCGCAGTTC
CGCCTGAAGTGCCAGCAGATGTTCCGCGAGAAGCTTGCCACCTCCCGGCTGATCCTGGTGTCTCACAGCATGCGCGACAT
CAACGAGTTCTGCGACGTCGTCGTGCTGGTCGCCCGGGGCCAGGTCCGCATCTTCGAGGACGTGGCTGAAGGCATCGCCG
CCTATCAGGGCGATGCCGACAGCGCAGCGCTACCCAACTTCCCACCCTACATCCGCACGCGCACCGCCGCGCTGCGCTAT
CTCCATCAACTGGAAGCCCAGGCGTCCGGTATTCCCAGTGATGAACCGGACGCAGATGCTGCTCCTCTTCCGGCCTCAAG
CTCCGACGCGACGCCTCCTACCGCGGCTACCCCGACTCCTCCTTCTGCCACCCCGCGATGA

Protein sequence :
MIELQSVTKSYPTPHGRRYVFRDLSFTFPENASIGLIGPNGAGKSTLMRLLGGIDSPDHGVVRSDRRISWPVGLAGGFQG
ALTGRDNVRFVCRVYGATGSAMRAKVRFTEEFAEIGEYFDLPVRSYSSGMRSRLAFGLSMAFDFDYYLIDEVMAVGDAQF
RLKCQQMFREKLATSRLILVSHSMRDINEFCDVVVLVARGQVRIFEDVAEGIAAYQGDADSAALPNFPPYIRTRTAALRY
LHQLEAQASGIPSDEPDADAAPLPASSSDATPPTAATPTPPSATPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 3e-64 57
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 4e-61 55
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 1e-47 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mpe_A0623 YP_001019820.1 ABC-type polysaccharide/polyol phosphate transport system ATPase component-like protein VFG1449 Protein 1e-64 57
Mpe_A0623 YP_001019820.1 ABC-type polysaccharide/polyol phosphate transport system ATPase component-like protein VFG0258 Protein 4e-48 46
Mpe_A0623 YP_001019820.1 ABC-type polysaccharide/polyol phosphate transport system ATPase component-like protein VFG0696 Protein 4e-47 45
Mpe_A0623 YP_001019820.1 ABC-type polysaccharide/polyol phosphate transport system ATPase component-like protein VFG2563 Protein 1e-39 42