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Name : pilB (Mpe_A0509) Accession : YP_001019706.1 Strain : Methylibium petroleiphilum PM1 Genome accession: NC_008825 Putative virulence/resistance : Virulence Product : pilus biogenesis ATPase Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 547297 - 549015 bp Length : 1719 bp Strand : - Note : - DNA sequence : GTGGATACCCTCGCCGATGCCCCGCAGAGTTCGCTGTCCGGCGTCGCGCGCGTGCTCGTGCACGCGGGCAAGCTCAACGT CAAGACCGCCGAAGATCTGGTCCGCAGCGCCAAGGAGCAGAAGCGCAGTTTCATCTCGGCGGTCCTGAGCGCTGGCGCCG TCAACCCTTCGGATCTTGCCCATACGCTGTCCAGCGTGCTGGCGATGCCCTTGCTCGATCTGGCGGCGGTCGATCCGCAG CGCCTGCCTCGCAACGTCATCGATGCCAAGCTGGCCACCCAGTATCAGGTATTGGTGCTGGGCAAGCGCGGCAACCGCCT CTTCATCGCCGGGGCCGACCCCACCGACCAGGAGGCCGCTGAACGCATCAAGTTCGCAACGCAGCTGACGCCCGAGTGGG TGATCGTCGAGCACGACAAGCTGTCCCGGCTCGTCGATGCAGCTACGACAACGGCCAGCGAGTCTCTCGAGTCGCTGGTC GCCGGTGATTTCGAGTTCGACGTCACCGAGGAAGACACCAGCGCATCCGACGCCGCCGAGGTCACCACCGACGTCGAGGA CGCACCGGTCGTTCGCTTCCTTCAGAAGATGCTGATCGATGCGATCAACGCACGAGCCTCCGATCTGCACTTCGAGCCGT TCGAATACAACTACCGGGTCCGCTTCCGCGTCGATGGCGAACTGCGCGAGATCACGCAACCGCCGATTGCCATCAAGGAC AAGCTCGCCTCCCGCATCAAGGTGATTTCCCGGCTCGACATTGCCGAGAAGCGCGTGCCGCAGGACGGCCGCATGAAGCT CAAGTTCGGCAGCAAGGCGATTGATTTCCGGGTCAGCACCCTGCCCACGCTGTTCGCCGAGAAGATCGTGATCCGTATCC TCGACCCGTCGAGTGCCAAGCTCGGCATCGAGGCGCTCGGCTACGAGAAGGTCGAGAAAGACCGCTTGCTGGAAGCCATC AAGCGCCCCTATGGCATGGTGCTGGTCACCGGTCCCACAGGCTCCGGCAAGACGGTGTCTCTGTACACCTGCCTGAACAT CCTGAACCAACCCGGCGTCAATATCTCCACGGTGGAGGACCCGGCCGAAATCAACCTCCCGGGCGTCAACCAGGTCAACG TCAACGACAAGGCAGGACTGAACTTCTCGGTCGCCTTGAAGGCCTTCCTGCGGCAGGATCCGGACGTCATCATGGTCGGC GAAATTCGCGATCTCGACACGGCGGACATCGCCATCAAGGCGGCGCAGACCGGGCACATGGTGATGAGCACGCTGCATAC CAACGACGCGCCGACGACGCTGACCCGCCTGATGAACATGGGCGTCGCGCCGTTCAACATCGCCTCCAGCGTGATCCTGA TCACGGCGCAGCGGCTGGCGCGCAAACTCTGCGAGAACTGCAAGGCGCCGGCCGATTACCCTCGCGAGGCGTTGCTTCGC GCCGGCTTCGCTGAATCGGACCTGGATGGCAGTTGGAAGCCCTATCGTGCCGTCGGCTGCTCCAGTTGCAGCAATGGCTA CCGGGGGCGTGTCGGCATCTACCAGGTCATGCCGATCAGCGAAGAGATCCAGCGCATCATCCTGACGCAGGGCAATGCGG TCGACATCGCAAAGCAGGCACAGCAAGAGGGCGTGCGCGATTTGCGTCAGTCGGGTCTGGTCAAGGTGCGAGCGGGTGTG ACCACCCTGGAAGAAGTCATCTCGGTCACCAACGAGTAA Protein sequence : MDTLADAPQSSLSGVARVLVHAGKLNVKTAEDLVRSAKEQKRSFISAVLSAGAVNPSDLAHTLSSVLAMPLLDLAAVDPQ RLPRNVIDAKLATQYQVLVLGKRGNRLFIAGADPTDQEAAERIKFATQLTPEWVIVEHDKLSRLVDAATTTASESLESLV AGDFEFDVTEEDTSASDAAEVTTDVEDAPVVRFLQKMLIDAINARASDLHFEPFEYNYRVRFRVDGELREITQPPIAIKD KLASRIKVISRLDIAEKRVPQDGRMKLKFGSKAIDFRVSTLPTLFAEKIVIRILDPSSAKLGIEALGYEKVEKDRLLEAI KRPYGMVLVTGPTGSGKTVSLYTCLNILNQPGVNISTVEDPAEINLPGVNQVNVNDKAGLNFSVALKAFLRQDPDVIMVG EIRDLDTADIAIKAAQTGHMVMSTLHTNDAPTTLTRLMNMGVAPFNIASSVILITAQRLARKLCENCKAPADYPREALLR AGFAESDLDGSWKPYRAVGCSSCSNGYRGRVGIYQVMPISEEIQRIILTQGNAVDIAKQAQQEGVRDLRQSGLVKVRAGV TTLEEVISVTNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-80 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-80 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_001019706.1 | pilus biogenesis ATPase | VFG0233 | Protein | 2e-142 | 54 |
| pilB | YP_001019706.1 | pilus biogenesis ATPase | VFG0112 | Protein | 2e-146 | 54 |
| pilB | YP_001019706.1 | pilus biogenesis ATPase | VFG1880 | Protein | 2e-136 | 50 |
| pilB | YP_001019706.1 | pilus biogenesis ATPase | VFG0182 | Protein | 1e-85 | 43 |
| pilB | YP_001019706.1 | pilus biogenesis ATPase | VFG2048 | Protein | 1e-80 | 42 |
