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Name : gspE (Mpe_A3137) Accession : YP_001022325.1 Strain : Methylibium petroleiphilum PM1 Genome accession: NC_008825 Putative virulence/resistance : Virulence Product : pili biogenesis ATPase Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3337187 - 3338611 bp Length : 1425 bp Strand : + Note : - DNA sequence : ATGGCCACCCGCCACCCGCTGCCCTACGCCTACGCGAAGGCCCACTCGCTGCTGCTCGAGGACAACGGCAGCCAGCTCGT GCTGTGGGCCGGCGACGCCGTCTCGCCGTCCGTGTTGAGCGAGGTGCTGCGCCTCTACGCCGTCGACGCCCTCGAGCGCG AAGCGCCGGCCGCACTGTCGCAACGCATCGCCAGCGTCTATGCCGGCGGCGAGTCGAGCGCCGCTGCGGTGATCGGCGAA GTCGAGAGTGGCGTCGACCTGTCGCGCCTGATGCAGGACCTGCCGGCGGTGGAAGACCTGCTCGAGGCCGCCAACGATGC ACCCATCATCCGCATGCTCAACGCGCTGCTGACGCAGGCCGCGAAGGACGGCGCGAGCGACATCCACATCGAGCCCTACG AGCGCAGCTCGGCAGTGCGCTTCCGCGTCGACGGCACGCTGCGCGAGGTGGTGCAGCCGAACAAGGCGCTGCACGCCGCG CTGATCTCGCGCCTGAAGATCATGGCCGAGCTCGACATCTCCGAGAAGCGCCTGCCGCAGGACGGCCGCATCTCGCTGCG CATCGGGGGCCGGGCAATCGACGTGCGCGTGTCCACGCTGCCCAGCGCGCACGGCGAACGTGCGGTGCTGCGGCTGCTCG ACAAGGGCGACAGCACGCGCTTCACGCTCGAATCGCTGGGCATGAGCGGCGAGACGCTCACCAAGTTCAAGCGCCTCACG GCACAGCCTCACGGCATCGTGCTCGTCACGGGACCGACCGGCTCGGGCAAGACCACCACGCTGTACGCCGGCCTCGGCCA GGTCGACACGCAGACGACCAACGTGCTGACGGTCGAGGACCCGATCGAGTACGAGCTGCCGGGGATCGGGCAGACGCAGG TCAATCCGAAGATCGACCTGACCTTCGCCAAATCGCTGCGCGCGATCCTGCGCCAGGACCCAGACGTCATCATGATCGGC GAGATCCGCGACTTCGAGACCGCGCAGATCGCGATCCAGGCCTCGCTGACCGGCCACCTGGTACTCGCCACGCTGCACAC CAACGACGCGCCCAGCGCCGTCACGCGACTGACCGACATGGGCGTCGAGCCCTTCCTGCTCAGCAGCTCGCTGCTCGGTG TGCTGGCGCAGCGGCTGGTGCGCAAGCTCTGCCCGGACTGCAAGAAGCAGGACGACAAGGGGCGCTGGCACCCGGTCGGC TGTCCCACCTGCGGCAGCACCGGCTATAAGGGTCGCACCGGCGTCTACGAATTGATGGTCGCCGACAGCGCCCTGCAGAG CCTGATCCACAGCCGTGCCGCCGAGTCGCAATTGTTCGTCGCTGCGGAACGGGGCGGCATGAAGACGATGCGCGAAGACG GCGAGCGGTTGGTGGAGAGCGGGGTGACATCGCTGGAAGAGCTGTTGAGGGTGACGAGGGAATGA Protein sequence : MATRHPLPYAYAKAHSLLLEDNGSQLVLWAGDAVSPSVLSEVLRLYAVDALEREAPAALSQRIASVYAGGESSAAAVIGE VESGVDLSRLMQDLPAVEDLLEAANDAPIIRMLNALLTQAAKDGASDIHIEPYERSSAVRFRVDGTLREVVQPNKALHAA LISRLKIMAELDISEKRLPQDGRISLRIGGRAIDVRVSTLPSAHGERAVLRLLDKGDSTRFTLESLGMSGETLTKFKRLT AQPHGIVLVTGPTGSGKTTTLYAGLGQVDTQTTNVLTVEDPIEYELPGIGQTQVNPKIDLTFAKSLRAILRQDPDVIMIG EIRDFETAQIAIQASLTGHLVLATLHTNDAPSAVTRLTDMGVEPFLLSSSLLGVLAQRLVRKLCPDCKKQDDKGRWHPVG CPTCGSTGYKGRTGVYELMVADSALQSLIHSRAAESQLFVAAERGGMKTMREDGERLVESGVTSLEELLRVTRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-115 | 54 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-115 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_001022325.1 | pili biogenesis ATPase | VFG2048 | Protein | 1e-115 | 54 |
| gspE | YP_001022325.1 | pili biogenesis ATPase | VFG1876 | Protein | 3e-118 | 53 |
| gspE | YP_001022325.1 | pili biogenesis ATPase | VFG0182 | Protein | 2e-115 | 53 |
| gspE | YP_001022325.1 | pili biogenesis ATPase | VFG0233 | Protein | 7e-83 | 47 |
| gspE | YP_001022325.1 | pili biogenesis ATPase | VFG2426 | Protein | 1e-73 | 46 |
| gspE | YP_001022325.1 | pili biogenesis ATPase | VFG0112 | Protein | 1e-82 | 44 |
