Gene Information

Name : Mpe_A1658 (Mpe_A1658)
Accession : YP_001020855.1
Strain : Methylibium petroleiphilum PM1
Genome accession: NC_008825
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 1786499 - 1787008 bp
Length : 510 bp
Strand : +
Note : -

DNA sequence :
ATGTCGATGACTTCCACTTCTTCCGCTGTCGATGCGCTGCTGGTGCGCGATGTCGATGGCCAGTACCGTCCTGCGCGTGC
CGAGGAGGTGCTGTCGCAGGCCCGCCGCGTGCTGTCGCAGCGGGTGCGCCGCGGCGCCACGATGTCGTCGCCACAGGCCG
TGAAGGACCACCTGCGCCTGGAGATCGGGATGCTGGAGCACGAGGTGTTCTGCGTGCTGTTCCTTGATGCGCAGCACCGG
ATCATTGCGCTGAAGCAGATGTTCCGCGGCACGGTGACGCAGACCTCGGTCTACCCGCGCGAGGTGGTCAAGGAGGCGCT
GGCCTGCAACGCTGCGGCGGTGATCCTGGCGCACAACCACCCTTCGGGTGCGGCCGAACCGAGCCGTGCCGACGAGTTCC
TGACGCAGACGCTGAAGACGGCGTTGGCGCTGGTGGACGTGCGGGTGCTCGATCACTTGGTGGTGGCGGGCGCCGAGGTT
CGTTCGTTTGCCGAGCTTGGACTGCTCTGA

Protein sequence :
MSMTSTSSAVDALLVRDVDGQYRPARAEEVLSQARRVLSQRVRRGATMSSPQAVKDHLRLEIGMLEHEVFCVLFLDAQHR
IIALKQMFRGTVTQTSVYPREVVKEALACNAAAVILAHNHPSGAAEPSRADEFLTQTLKTALALVDVRVLDHLVVAGAEV
RSFAELGLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00479.1 unknown Not tested SHI-1 Protein 1e-13 54
ECO103_3589 YP_003223446.1 radC-like protein YeeS Not tested LEE Protein 1e-12 54
yeeS CAE85201.1 YeeS protein Not tested PAI V 536 Protein 2e-13 54
Z1657 NP_287160.1 RadC family DNA repair protein Not tested TAI Protein 1e-12 53
yeeS AAZ04458.1 putative RadC-like protein Not tested PAI I APEC-O1 Protein 1e-13 53
z1217 CAD33787.1 Z1217 protein Not tested PAI I 536 Protein 4e-13 53
Z1217 NP_286752.1 RadC family DNA repair protein Not tested TAI Protein 5e-13 53
yeeS YP_854323.1 radC-like protein YeeS Not tested PAI I APEC-O1 Protein 2e-13 53
unnamed CAD42098.1 hypothetical protein Not tested PAI II 536 Protein 3e-13 53
c5152 NP_757000.1 radC-like protein yeeS Not tested PAI II CFT073 Protein 2e-13 53
aec73 AAW51756.1 Aec73 Not tested AGI-3 Protein 2e-13 53
yeeS CAI43901.1 YeeS protein Not tested LEE Protein 2e-13 53
unnamed AAL08475.1 unknown Not tested SRL Protein 4e-13 53
yeeS ADD91702.1 YeeS Not tested PAI-I AL862 Protein 3e-13 53
yeeS CAI43846.1 YeeS protein Not tested LEE Protein 3e-13 53
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 4e-15 51
yeeS NP_838484.1 RADC family DNA repair protein Not tested SHI-1 Protein 2e-13 48
yeeS NP_708770.1 RADC family DNA repair protein Not tested SHI-1 Protein 2e-13 48
unnamed CAD66203.1 hypothetical protein Not tested PAI III 536 Protein 1e-13 47
unnamed AAL67345.1 intergenic-region protein Not tested PAI II CFT073 Protein 2e-13 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mpe_A1658 YP_001020855.1 hypothetical protein VFG1528 Protein 1e-13 53
Mpe_A1658 YP_001020855.1 hypothetical protein VFG1617 Protein 1e-13 53
Mpe_A1658 YP_001020855.1 hypothetical protein VFG1066 Protein 2e-13 53
Mpe_A1658 YP_001020855.1 hypothetical protein VFG0660 Protein 5e-14 48
Mpe_A1658 YP_001020855.1 hypothetical protein VFG1678 Protein 5e-14 47