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Name : Mpe_A0011 (Mpe_A0011) Accession : YP_001019208.1 Strain : Methylibium petroleiphilum PM1 Genome accession: NC_008825 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : 3.1.21.3 Position : 12269 - 15454 bp Length : 3186 bp Strand : + Note : - DNA sequence : ATGACGGAGGACCAGCTCGAACAAGAGTGCCTGGCGTGGCTGGCCGACGTGGGCTGGCAACACCGCTATGGGCCGGACAT CGCGCCCGATGGCGACGCCCCCGAGCGCGACAGCTACCGCCAAGTGCTGCTGCTCGGGCGCTTGCGCTCCGCAGTGGCCG CGCTGAACCCGACCGTGCCCGCGGCGGCGCGCGAGGATGCCATCCGCCAGGTGCTGGATCTCGGCACCCCGGTGCTGTTG GCCGCCAACCGACACTTTCACCGGCTGCTGGTGGGCGGCGTGCCGGTGCAGTACCAACAAGACGGCGAAACGCGCGGCGA CTTTGTGCGTTTGGTGGACTGGTCCGACCCGTCGCGCAACGAGTGGCTGGCCGTCAACCAGTTCTCCGTGACCGGGCCAC ACCACACGCGCCGGCCCGACATCGTGCTGTTCGTCAACGGCCTGCCGCTGGTGCTGATCGAGCTGAAGAACCCGGCGGAC CTGAACGCCGACGTGTGGAAGGCCTTCCACCAGATCCAGACCTACAAGGCGCAGATCCCGGACATCTTCCAGACCAACGA GGTGCTGGTGGTGTCCGACGGCAGCGAGGCGCTGCTCGGCTCGCTCTCGGCCGACAGCGAGCGCTTCATGGCCTGGCGCA CGATCGACGGCAACACGCTCGACCCGCTGGGCAAGTTCCATGAGCTGCAGACGCTGGTGCGTGGCGCGCTGGCGCCGGCC TATCTGCTCGACTACCTGCGCTACTTCGTGCTCTTCGAGGACGACGGCCAACTCGCCAAGAAGATCGCCGGCTATCACCA GTTCCACGCGGTGCGCGCGGCCATTGCGCAGGTGGTGACCGCGTCGCGCCCGAACAGCGATGCGCGTTTGCGTGGCAAGG GCGGCGTGGTCTGGCACACCCAGGGCAGCGGCAAGAGCATCACGATGACCTGCTTCGCAGCGCGCGTGATGCAGGAGCCG GCGATGGAGAACCCGACCATCGTCGTCATCACCGACCGTAACGACCTGGACGGCCAGCTCTTCGGCGTGTTCAGCCTGGC GCAGGATCTATTGCGCGAGCAGCCGGTGCAGGCGAACACCCGGCAGGAACTGCGCGCGCTGCTCGGCAACCGCCCGAGCG GCGGCATCGTGTTCGCCACCATCCAGAAGTTCATGCCGGGCGAAGACGAGGACACGTTCCCGCTGCTCTCCGATCGCCAC AACATCGTCGTGATGGCCGACGAGGCGCACCGCACGCAGTACGGCTTCGAGGCCAAGCTGAAGACGCCGAAGTCGGCGCT CAAGGCATCGAGCGAGCTGACCACGGGCAATGGCCAGCCACCCGCGCACCGGGCCGAGTTCGCGCCGAGCGCGAAGTACC AAGTGGGATACGCCCAGCACCTGCGCGATGCGCTGCCCAACGCCACCTTCGTGGCCTTCACCGGCACGCCGGTGTCGGGC GAAGACCGCGACACGCGGGCGGTGTTCGGCGACTACATCAGCGTCTACGACATGCAGCAGGCCAAGGAAGATGGCGCCAC GGTGGCCATCTACTACGAGAGCCGGCTCGCCAAGCTGGGCCTCAAGGCCGACGAGATGGCCACCATCGACGACGAGGTCG ACGAGCTGGCCGAAGACGAGGAAGAGAGCCAGCAGGCCAAGCTCAAGAGCCGCTGGGCGGCGCTGGAGAAGGTGGTCGGT GCCGCGCCGCGCGTCGCCCAGGTGGCGGCGGATCTGGTGGCGCACTTCGAGGAGCGCAACAAGGCGCAGACCGGCAAGGC CATGGTGGTGGCCATGAGCCGCGAGATCTGCGTGCATGTCTACGACGAGATCGTCAAGCTGCGACCCGACTGGCACAGCC CCGACCCCGAGCAAGGCACGATCAAGATCGTGATGACGGGCTCGGCCAGCGACAAGGCACTGCTGCGGCCCCACATCTAC AGCGCCCAGGTAAAAAAGCGGCTGGAGAAGCGCTTCAAGAACCCGGCCGACCCGCTGCGCATGGTCATCGTGCGCGACAT GTGGCTCACGGGCTTCGACGCGCCCTGCGTGCACACGCTCTACGTCGACAAGCCGATGAAGGGCCACAACCTCATGCAGG CGATTGCGCGCGTGAACCGCGTGTTCAAGGACAAGCAGGGCGGCCTGGTGGTGGACTACATCGGCATCGCCAACGAGTTG AAGTCGGCGTTGAAGGAGTACACCGCAGCACAGGGCCGCGGCCGGCCGACGGTGGACGCGCACGAGGCGTATAGCGTGTT GGCCGAGAAGCTCGACGCGCTGCGAGGCATGCTGGCGGGAACGAACGGGCACGGCTTCGACTACAGCGGGTTCCTCACTG GGGGTCACAAGACACTGGCCGGCGCCGCCAACTTCGTGCTTGGGATCAAGGAAGGCAAGAAGCGCTTCGCCGACTTGGCG CTGGCGATGAGCAAAGCCTTCACGCTCTGCTGCACGCTCGACGAAGCCAAGGCCGTGCGCGAGGAGGTGGCCTTCTTCCA GGCCGTGAAGGTGATCCTGACCAAGCGGGACATCAGCGCGCAGAAGAAGATGGACGAGCAACGTGAACTGGCCATCCGGC AGATCATCAGCGCGGCCGTGGTCTCGGAGGAGGTGGTCGACATCTTCGACGCCGTGGGGCTGGACAAGCCCAACATCGGC ATCCTGGACGACGCCTTCCTGGCCGAGGTTCGCAACCTGCCAGAGCGCAACCTCGCGGTGGAATTGCTGGAGCGGCTGCT CGAAGGCGAGATCAAGTCACGCTTCGCCGGCAACGTGGTCCAGAACAAGAAGTTCTCGGACATGCTGGCCGACGTGGTGC AGCGCTACCAAAACCGGTCCATCGAAGCTGCTCAGGTGATGGAAGAGCTGGTGCAGATGGCCAAGAAGTTTCGCGCGGCT GCGGCGCGCGGGGAGCAGCTTGGCCTCACCGAAGACGAAGTGCGCTTCTATGACGCGCTGGCCAACAACGAATCCGCCGT TCGAGAGCTGAACGATGAGACGCTGAAGAAGATCGCCCATGAGCTGGCCGAGAACTTGCGCAAGAACCTCACGGTCGATT GGTCCGCGAGAGAAAGCGTCCAGGCCAAGCTGCGACTGATGGTCAAGCGCATCCTGCGCAAGTACAAGTACCCACCGGAT CAGCAGGACGCTGCGGTGGAGCTTGTGCTGCAGCAGGCCAAGGCGTTGGGAGAAGCGTGGGCATGA Protein sequence : MTEDQLEQECLAWLADVGWQHRYGPDIAPDGDAPERDSYRQVLLLGRLRSAVAALNPTVPAAAREDAIRQVLDLGTPVLL AANRHFHRLLVGGVPVQYQQDGETRGDFVRLVDWSDPSRNEWLAVNQFSVTGPHHTRRPDIVLFVNGLPLVLIELKNPAD LNADVWKAFHQIQTYKAQIPDIFQTNEVLVVSDGSEALLGSLSADSERFMAWRTIDGNTLDPLGKFHELQTLVRGALAPA YLLDYLRYFVLFEDDGQLAKKIAGYHQFHAVRAAIAQVVTASRPNSDARLRGKGGVVWHTQGSGKSITMTCFAARVMQEP AMENPTIVVITDRNDLDGQLFGVFSLAQDLLREQPVQANTRQELRALLGNRPSGGIVFATIQKFMPGEDEDTFPLLSDRH NIVVMADEAHRTQYGFEAKLKTPKSALKASSELTTGNGQPPAHRAEFAPSAKYQVGYAQHLRDALPNATFVAFTGTPVSG EDRDTRAVFGDYISVYDMQQAKEDGATVAIYYESRLAKLGLKADEMATIDDEVDELAEDEEESQQAKLKSRWAALEKVVG AAPRVAQVAADLVAHFEERNKAQTGKAMVVAMSREICVHVYDEIVKLRPDWHSPDPEQGTIKIVMTGSASDKALLRPHIY SAQVKKRLEKRFKNPADPLRMVIVRDMWLTGFDAPCVHTLYVDKPMKGHNLMQAIARVNRVFKDKQGGLVVDYIGIANEL KSALKEYTAAQGRGRPTVDAHEAYSVLAEKLDALRGMLAGTNGHGFDYSGFLTGGHKTLAGAANFVLGIKEGKKRFADLA LAMSKAFTLCCTLDEAKAVREEVAFFQAVKVILTKRDISAQKKMDEQRELAIRQIISAAVVSEEVVDIFDAVGLDKPNIG ILDDAFLAEVRNLPERNLAVELLERLLEGEIKSRFAGNVVQNKKFSDMLADVVQRYQNRSIEAAQVMEELVQMAKKFRAA AARGEQLGLTEDEVRFYDALANNESAVRELNDETLKKIAHELAENLRKNLTVDWSARESVQAKLRLMVKRILRKYKYPPD QQDAAVELVLQQAKALGEAWA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 55 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 46 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 46 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 46 |
