Gene Information

Name : rph (P9303_24551)
Accession : YP_001018451.1
Strain : Prochlorococcus marinus MIT 9303
Genome accession: NC_008820
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2156894 - 2157628 bp
Length : 735 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCTCACACCCCCCCAGCCACGTGCTGACGGCCGCCTTGCTGACGTGATGCGGCCCCTTCAGGTCACATGGGATCCAAT
GGGCTTTGCCCTCAGTTCCTTAATCATCCGCACTGGTCGCACCGCAGTGCTCTGCAGTGTTTGCGTTGAAGAAGGTGTAC
CCCGCTGGCGCCAAGGCCAAGGCAAAGGCTGGCTCAGCGCCGAGTACCGCCTTCTGCCTGGGTCTACACCGCAAAGACAG
AACCGTGAACTGCTCAAGCTTTCCGGACGCACTCAAGAAATTCAACGCCTCATTGGCCGCAGCCTGCGCGCCGTGATCGA
CATGGCTGCTCTTAGGGAAACCACCCTGAGAATTGATTGTGACGTTATTCAGGCTGATGCCGGCACACGTACAGCCGCCA
TCACCGGCGCTTGGATCGCCTTAAAACGAGGCTGCGATCGCTTGCTGGAACAAGGCCTGCTCACGCATCAACCCGTCATC
GACCAAGTTGCTGCAGTATCCGTTGGTTTAGTCGATAGTTATCCCCTTCTTGACCTCGACTACAGCGAAGACTCCAGGGC
TGATGTGGATCTAAACGTGGTAATGGGCTCCAATGGGCACCTATTGGAACTGCAGGGCACCGCTGAAGGGGCTCCATTCA
GCAGGAATCAACTCAACGACTTGCTGAATCTGGCAGAACCCGGCCTACAACATCTACAAACCTTCCAACGTTCGGCATTA
ATGCAAGAAGACTAA

Protein sequence :
MLTPPQPRADGRLADVMRPLQVTWDPMGFALSSLIIRTGRTAVLCSVCVEEGVPRWRQGQGKGWLSAEYRLLPGSTPQRQ
NRELLKLSGRTQEIQRLIGRSLRAVIDMAALRETTLRIDCDVIQADAGTRTAAITGAWIALKRGCDRLLEQGLLTHQPVI
DQVAAVSVGLVDSYPLLDLDYSEDSRADVDLNVVMGSNGHLLELQGTAEGAPFSRNQLNDLLNLAEPGLQHLQTFQRSAL
MQED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-51 50