Gene Information

Name : P9303_18711 (P9303_18711)
Accession : YP_001017878.1
Strain : Prochlorococcus marinus MIT 9303
Genome accession: NC_008820
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1632625 - 1633494 bp
Length : 870 bp
Strand : +
Note : COG1108 ABC-type Mn2+/Zn2+ transporters, permease components [inorganic ion transport and metabolism]

DNA sequence : 
ATGACAGAGCTTCTGGCAACAGCGACAACACTGTCTTGGTTATTGGAACCCCTTAGTCATGAGTTCATGGTGCGTGCCTT
GGTGGTGAGTGCTCTTGTTGGTGGGGTTTGTGGACTGCTCTCCTGCTACATGACCCTCAAGGGCTGGGCGTTAATGGGCG
ATGCGGTCTCCCATGCCGTGATGCCCGGAGTGGTTGTGGCCTATGCCCTGGGGTTGCCGTTCTCAATAGGAGCCTTTGTC
TTTGGGGTGGGTTCGGTGGCCTTGATTGGCTTTGTGAAACAGAAGTCACGGGTCAAGGAAGACACTGTGATTGGGCTTGT
CTTCACAGGCTTTTTTGCGCTCGGATTGGTACTGGTATCCAAAACCAGAAGCAACATCGACCTCACCCATATTCTTTTTG
GCAATGTGCTGGGAATCTCAATGGCTGATATCCAGCAAACGCTGTTGATTACTGGAATTGTGGTGGCAATTCTGTTGGTT
CTTCGCAGGGATTTTATGTTGTTCTGCTTTGATCCAACCCATGCACGATCGATCGGCATCAATACAGGGCTACTGCATTA
TTTACTGTTATCGGTGTTATCACTTGCTGCCGTTGCTGGTCTACAGAGCGTAGGCATCATTCTGGTGGTTGCGATGTTGA
TCACTCCTGGTGCTACGGCCTATCTACTCACAGACCGCTTTGATCGGATGACTTTGCTCGCAATCCTCAGCAGTTCCCTT
TCAAGTGTTCTAGGTGTCTACATCAGCTATTGGACCGATAGTTCCACCGCAGGCTGCATTGTGCTGGTGCAGACCGTTCT
TTTCCTGATGACTTTCTTATTGGCACCTCGATACGGCATTTTGAAAGTTCAGCGTTCACTTGCTCCATAG

Protein sequence : 
MTELLATATTLSWLLEPLSHEFMVRALVVSALVGGVCGLLSCYMTLKGWALMGDAVSHAVMPGVVVAYALGLPFSIGAFV
FGVGSVALIGFVKQKSRVKEDTVIGLVFTGFFALGLVLVSKTRSNIDLTHILFGNVLGISMADIQQTLLITGIVVAILLV
LRRDFMLFCFDPTHARSIGINTGLLHYLLLSVLSLAAVAGLQSVGIILVVAMLITPGATAYLLTDRFDRMTLLAILSSSL
SSVLGVYISYWTDSSTAGCIVLVQTVLFLMTFLLAPRYGILKVQRSLAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-51 49
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-51 49
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-51 49
sitC NP_461784.1 permease Virulence SPI-1 Protein 4e-51 49
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 3e-51 49
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-42 48
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-42 48
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 6e-42 48
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 6e-42 48
sitD NP_461785.1 permease Virulence SPI-1 Protein 4e-42 48
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 2e-37 43
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 2e-37 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P9303_18711 YP_001017878.1 ABC transporter BAC0442 Protein 1e-53 50
P9303_18711 YP_001017878.1 ABC transporter BAC0351 Protein 2e-51 49
P9303_18711 YP_001017878.1 ABC transporter BAC0352 Protein 2e-42 48
P9303_18711 YP_001017878.1 ABC transporter BAC0441 Protein 8e-45 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P9303_18711 YP_001017878.1 ABC transporter VFG0527 Protein 2e-51 49
P9303_18711 YP_001017878.1 ABC transporter VFG0528 Protein 2e-42 48