Gene Information

Name : P9303_18691 (P9303_18691)
Accession : YP_001017876.1
Strain : Prochlorococcus marinus MIT 9303
Genome accession: NC_008820
Putative virulence/resistance : Virulence
Product : ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1630968 - 1631831 bp
Length : 864 bp
Strand : +
Note : COG803 ABC-type metal ion transporter, periplasmic component/surface adhesin [inorganic ion transport and metabolism]

DNA sequence : 
ATGGCGAACCAGTACCAGGCCCAAGACTCAGACAAACCTCTTGTGCTCACCACCTTCACGGTGCTGGCAGACATGGCACG
CAATGTTGCCGGCGACCGTTTAAATGTGCGCTCCATCGTCAAGCAGGGCGCTGAAATTCATGGTTATCAGCCAACGCCAA
GTGACCTGGCCCAAGCTGTTGGTGCGGATTTGATTGTCGAGAATGGCTTTGGGCTGGAACTCTGGGCGCGCAAGTTCACT
GCCGCTGCTGGCAAGGTCTCAACGCTGACTCTTAGTGAGGGGATGGAGCCGCTGTTAATTGAGGGAGATGCCTACGCAGG
CAAGCCCAATCCTCATGCCTGGATGTCTCCGCAACGGGCGATGCAATACGTCGATCAACTTGTGAAAGCCTTTAGCAGTC
TTGATCCAGAAGGTGCCAAGACCTTTGCCAGTAATGGTCGTCGCTACAAAGACCAGCTCCAACAACTTGATGATGAGCTA
AGGACATCTCTGGCAACGATTCCAGCCAAACGTCGTTTACTGGTCACCTGTGAGGGAGCCTTCACCTACTTGGCAAAGGA
TTACGGCATGGAGGAGGCTTACCTTTGGCCAGTCAATGCCGAGAGTGAGGTCACACCTCAACGTATGGCCAAACTCATCG
AGACCGTCAAGCTGCGTGAAGTGCCAGCGATCTTCTGTGAAAGCACTGTCAGCGACAAGGCTCAGCGTGAGGTCGCACGG
GCTAGCGGCGCTCGGTTGGGCGGTACATTCTTTGTTGATTCTCTTTCGCAAGCCGATGGGCCGGCCTCGACCTTGCTCGA
TCTTCAACGACATAACGTCGGTCTGATTCTGAATGAATTGGTACCAGTCAATCGCGAAAAATAA

Protein sequence : 
MANQYQAQDSDKPLVLTTFTVLADMARNVAGDRLNVRSIVKQGAEIHGYQPTPSDLAQAVGADLIVENGFGLELWARKFT
AAAGKVSTLTLSEGMEPLLIEGDAYAGKPNPHAWMSPQRAMQYVDQLVKAFSSLDPEGAKTFASNGRRYKDQLQQLDDEL
RTSLATIPAKRRLLVTCEGAFTYLAKDYGMEEAYLWPVNAESEVTPQRMAKLIETVKLREVPAIFCESTVSDKAQREVAR
ASGARLGGTFFVDSLSQADGPASTLLDLQRHNVGLILNELVPVNREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-65 53
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-65 53
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-65 53
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-65 53
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-65 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P9303_18691 YP_001017876.1 ABC transporter substrate-binding protein BAC0349 Protein 1e-65 53
P9303_18691 YP_001017876.1 ABC transporter substrate-binding protein BAC0439 Protein 3e-58 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P9303_18691 YP_001017876.1 ABC transporter substrate-binding protein VFG0525 Protein 1e-65 53