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Name : clpC (P9303_09911) Accession : YP_001017005.1 Strain : Prochlorococcus marinus MIT 9303 Genome accession: NC_008820 Putative virulence/resistance : Virulence Product : protein ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.92 Position : 901643 - 904222 bp Length : 2580 bp Strand : - Note : COG542 ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones] DNA sequence : ATGTTCGAGCGGTTTACCGAGAAGGCCATCAAGGTGATAATGCTGGCCCAGGAAGAGGCCCGGCGCCTTGGTCATAATTT CGTGGGCACCGAGCAGATTCTTTTGGGATTGATCGGTGAGGGCACAGGTGTGGCAGCGAAGGTTCTCAAGTCAATGAGCG TGAACCTTAAAGACGCCCGCGTTGAAGTCGAAAAGATCATTGGCCGTGGTTCAGGCTTCGTCGCCGTAGAAATCCCCTTC ACACCCAGAGCAAAGCGCGTACTGGAACTCTCTCTAGAAGAAGCCCGACAACTTGGCCACAATTACATCGGCACAGAACA TTTACTGCTTGGTCTCATCCGAGAAGGTGAGGGTGTAGCAGCCCGAGTACTCGAAAACCTTGGTGTAGACCTAGCAAAGG TGCGCACCCAAGTAATCCGCATGCTCGGAGAAACCGCCGAGGTCACTGCAGGCGGAGGTGGAGGCAAAGGCTCAACGAAG ACAGCCACACTTGATGAATTCGGCAGCAACCTGACCCAGCTAGCCAATGAATCCAAGCTTGATCCTGTTGTCGGGCGACA AAATGAAATCGATCGTGTTATTCAGATCCTCGGAAGACGCACAAAGAACAACCCTGTACTGATTGGAGAGCCTGGAGTTG GAAAAACAGCAATTGCTGAAGGCCTCGCTCAACGCATCCAACAGGGAGATATTCCCGACATCCTTGAAGAGAAGAGGGTT CTAACCCTCGACATCGGCCTGCTAGTTGCTGGAACCAAATATCGAGGAGAGTTCGAAGAACGGCTCAAAAAGATCATGGA AGAGATCAAGTCCGCAGGCAACGTGATCCTGGTCATCGATGAAGTGCACACACTGATTGGAGCAGGCGCTGCAGAAGGTG CAATCGATGCCGCCAACATTCTCAAACCAGCGCTAGCTAGAGGAGAACTGCAGTGCATTGGTGCCACCACTCTTGACGAA TATCGAAAACACATCGAACGGGATGCTGCCCTAGAACGCCGATTTCAGCCGGTCATGGTTGGCGAGCCATCGATCGCTGA AACCATTGAGATCCTGCAAGGATTAAGGGAGCGCTACGAACAGCATCACCGCCTAAAAATCACAGACGAAGCCCTAGATG CCGCCGCAAACCTAGGTGATCGCTATATCTCTGACCGCTTCCTGCCGGATAAGGCCATCGACTTAATCGATGAAGCTGGC AGCCGTGTGCGTTTACTTAACTCCAAACTTCCCCCTGCGGCAAAAGAGGTCGACAAAGAATTACGCAAGGTTCAAAAGGA AAAAGAAGATGCCGTTCGTGATCAGGACTTCGCCAAAGCCGGGGAATTACGTGAAAAAGAAGTTGAGCTAAGAGAAAAGA TCCGCACTCTGCTTCAAAGCAGTCGCCAAGACAGCGAGGAATCGCCCCCCGCTGAAGCAGAAAATGCTGTTCGTTCCAGC GATGAGACTCCAACGCCTCAACCTGAAAAAGACACAACAGCTCCATCAATTCCTCCTCTCACCACACCACTGGTGACAGA AGAAGATATTGCCAACATCGTTGCGGCTTGGACCGGAGTACCTGTACAAAAGCTCACCGAAAGCGAATCAGTGAAGCTCC TAAACATGGAGGAAACCCTCCACCAGAGGCTGATTGGCCAAGATGAAGCCGTCAAAGCAGTCTCGAAAGCCATCCGTCGA GCCAGGGTGGGCCTCAAAAACCCCAATCGCCCCATTGCCAGTTTCATCTTTTCAGGCCCTACGGGCGTCGGCAAAACCGA ACTAACCAAAGCTCTCGCCACCTACTTCTTTGGTAGCGAAGAAGCCATGATCCGACTAGACATGTCGGAATTCATGGAGC GACATACGGTCAGCAAGCTGATCGGATCACCTCCTGGCTATGTGGGGTTCAACGAAGGGGGACAACTCACCGAAGCTGTT CGTCGCAGACCTTATACCGTTGTGCTCTTCGACGAAATCGAGAAGGCACACCCAGATGTTTTTAACCTGCTGCTTCAATT ATTGGAAGATGGTCGACTAACTGACTCCAAAGGAAGAACAGTGGACTTCAAGAACACCTTGATCATTATGACTTCGAATA TCGGTTCAAAAGTGATTGAGAAAGGAGGCGGAGGACTTGGCTTCGAATTCTCAGGTGAAAATGCAGAAGAAAGTCAATAC AACCGGATCAAATCCCTGGTCAACGAAGAACTAAAACAATACTTCCGTCCTGAATTTCTCAACCGTCTCGATGAAATTAT CGTCTTCCGCCAACTCAGCAGAGATGAGGTGAAAGAAATCGCTGAGATCATGCTTAAAGAAGTGTTCTCTCGCATGCAAG ACAAAGGGATCACTCTCACTGTTTCAGATGCATTCAAAGAGCGACTAGTGGAAGAGGGATACAACCCCTCTTATGGAGCG AGGCCGCTGCGAAGGGCTGTCATGCGGCTCATGGAAGACAGTCTTGCCGAGGAAGTGCTTACTGGCCGCATCAAGGACGG TGATGCTGCGGAAATGGACGTAGATGACAACAAGCAAATCGTTGTCCGCCATGTCAGCAAAACTACTGCCACACCGGAAC TCGCTGGAGCAGGCGTCTGA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMSVNLKDARVEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGETAEVTAGGGGGKGSTK TATLDEFGSNLTQLANESKLDPVVGRQNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEEKRV LTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDE YRKHIERDAALERRFQPVMVGEPSIAETIEILQGLRERYEQHHRLKITDEALDAAANLGDRYISDRFLPDKAIDLIDEAG SRVRLLNSKLPPAAKEVDKELRKVQKEKEDAVRDQDFAKAGELREKEVELREKIRTLLQSSRQDSEESPPAEAENAVRSS DETPTPQPEKDTTAPSIPPLTTPLVTEEDIANIVAAWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKAVSKAIRR ARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAV RRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEESQY NRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLSRDEVKEIAEIMLKEVFSRMQDKGITLTVSDAFKERLVEEGYNPSYGA RPLRRAVMRLMEDSLAEEVLTGRIKDGDAAEMDVDDNKQIVVRHVSKTTATPELAGAGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001017005.1 | protein ClpC | VFG0079 | Protein | 0.0 | 57 |
| clpC | YP_001017005.1 | protein ClpC | VFG0080 | Protein | 7e-146 | 50 |
