Gene Information

Name : spsE (NATL1_08721)
Accession : YP_001014695.1
Strain : Prochlorococcus marinus NATL1A
Genome accession: NC_008819
Putative virulence/resistance : Virulence
Product : ialic acid synthase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2089
EC number : -
Position : 809477 - 810505 bp
Length : 1029 bp
Strand : +
Note : COG2089 Sialic acid synthase [Cell envelope biogenesis, outer membrane]

DNA sequence : 
ATGAATATCAACGGTAGAGAAATTAATGAGAAAAACACTCCCTTAATAATAGCGGAACTAGGAATTAATCACGGTGGAGA
TATAGATATAGCAAAAAATATGGTAACTTTAGCAGCTTCATCAGGAGCAGAGTGCATTAAACATCAAACACATTTTGTGG
AAGATGAAATGACAGAAGAAGCGAAAGATATTTACCCTCCCAATGCTACTGAATCCATATGGGATGTTATAAAAAAATCA
TCTCTTAATAAAGATGAAGAAATAGAATTAAAAAAATATACAGAGGATTTAGGATTAATATATATATCAACTCCTTTCTC
AAGAGCTGCTGCTGATTTTCTAAATGATATTAATATACCTGCCTTTAAAATAGGATCGGGTGAGGCTAGTAATATCCCGC
TTATAAGACATATATCATCATTTGGAAAGCCTATTATTTTATCAACAGGAATGCATTCTTTAGAGCAAATAATTGAACCA
GTTAATATTTTCAAGAAAAACAAAATAGATTTCGCCCTTCTAGAATGTACGAATTCTTACCCTTCACCACCTGAAATAGT
ATCTCTCCAAGGAATAAAAGATTTAAAAAAAGCTTTTCCTGAGGCAATTGTTGGTTTTTCTGATCATTCGATAGGGCCTT
ACATATCATTGGGAGCAGTTGCATTAGGGGCTTGTATTATTGAAAGACACTTTACTGACTCAAGGTATAGAGAAGGTCCT
GACATCTCTTGTTCAATGGATCCCCTAGAACTAAGACTTTTAGTAGATAGGTCTAAAGAAATTTTTACAGCGATAAATAA
TCCAAAAGAAAGAACTCTTCAGGAAGAAGATGTTTACAAATTTGCGAGAGGTACTATTGTAGCTGATAGAGAAATTAAAA
AAGGAACAATTATCGCAGAAAAAGATATATGGGCAAGACGTCCTGGTAACGGTGAAATAGCAGCTGCATTCTATGATAAT
ATCTTGGGAAGAAAAACGAAAAAAGATATAAAATATAATCAACAATTAAGATGGAAAGATCTTATTTAA

Protein sequence : 
MNINGREINEKNTPLIIAELGINHGGDIDIAKNMVTLAASSGAECIKHQTHFVEDEMTEEAKDIYPPNATESIWDVIKKS
SLNKDEEIELKKYTEDLGLIYISTPFSRAAADFLNDINIPAFKIGSGEASNIPLIRHISSFGKPIILSTGMHSLEQIIEP
VNIFKKNKIDFALLECTNSYPSPPEIVSLQGIKDLKKAFPEAIVGFSDHSIGPYISLGAVALGACIIERHFTDSRYREGP
DISCSMDPLELRLLVDRSKEIFTAINNPKERTLQEEDVYKFARGTIVADREIKKGTIIAEKDIWARRPGNGEIAAAFYDN
ILGRKTKKDIKYNQQLRWKDLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
siaC NP_273132.1 polysialic acid capsule biosynthesis protein SiaC Not tested IHT-A Protein 7e-74 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spsE YP_001014695.1 ialic acid synthase VFG0252 Protein 3e-74 48