Gene Information

Name : NATL1_06591 (NATL1_06591)
Accession : YP_001014486.1
Strain : Prochlorococcus marinus NATL1A
Genome accession: NC_008819
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 605105 - 605977 bp
Length : 873 bp
Strand : +
Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]

DNA sequence : 
ATGAGTGAATTTCTAATTTCCATTACGCCAATTGATTGGCTATTGGATCCATTAACTCATGACTTCATGAGAAGAGCTTT
AATGGTTAGCGCATTAGTGGGAGGTGTTTGTGGACTTTTATCTTGTTATATGACCTTAAAAGGTTGGGCATTAATGGGTG
ACGCAGTTTCCCATGCGGTTATGCCAGGGGTGGTTGTTGCTTATGCATTAGGACTCCCTTTTTCCTTAGGTGCTTTTGTT
TTTGGAGTTGGTTCAGTTGCTTTGATTGGGTTTGTTAAGCAGAAATCTAGAATTAAAGAAGATACAGTAATAGGACTTGT
TTTTACTGGCTTTTTTGCATTAGGCCTTGTATTGGTTTCAAAAATAAAAAGTAATATTGATCTAATGCAAATACTTTTTG
GAAGCCCTCTGGGGATCTCTCGTTCAGATGTTAACCAGACTTTAATAATTTCGTTTATTGTTATATCTATTTTGCTTATA
TTTAGAAAAGATTTAATGCTTTATTGTTTTGATGCTAAGCATGCTAGATCTATAGGAATTAATACAGGTATACTTCATTA
TTTATTATTAACTTTATTATCTCTATCAGCAGTAGTTGGTTTGCAAACTGTTGGAATTATCCTCGTAGTAGCAATGCTTA
TTACGCCTGGTGCTACAGCATACTTGTTAACTGATCGTTTTGATCAAATGACTTTATTAGCAGTTATTAGTAGCTCATTC
TCAAGTATTATAGGTGTCTATATAAGTTATTGGTCTGATATTGAAACAGGTGGATCTATCGTTTTAGTTCAAACATTAAT
ATTTCTAATAGCATTTTTATTCGCTCCAAGATATGGAATATTTAAAAAACAATCTCTAATAAAAAATGATTAA

Protein sequence : 
MSEFLISITPIDWLLDPLTHDFMRRALMVSALVGGVCGLLSCYMTLKGWALMGDAVSHAVMPGVVVAYALGLPFSLGAFV
FGVGSVALIGFVKQKSRIKEDTVIGLVFTGFFALGLVLVSKIKSNIDLMQILFGSPLGISRSDVNQTLIISFIVISILLI
FRKDLMLYCFDAKHARSIGINTGILHYLLLTLLSLSAVVGLQTVGIILVVAMLITPGATAYLLTDRFDQMTLLAVISSSF
SSIIGVYISYWSDIETGGSIVLVQTLIFLIAFLFAPRYGIFKKQSLIKND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-50 49
sitC NP_461784.1 permease Virulence SPI-1 Protein 3e-50 49
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-50 49
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-50 49
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 3e-50 49
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-41 47
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-41 47
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-41 47
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-41 47
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-41 47
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 3e-36 43
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 3e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NATL1_06591 YP_001014486.1 ABC transporter BAC0351 Protein 2e-50 49
NATL1_06591 YP_001014486.1 ABC transporter BAC0442 Protein 4e-50 49
NATL1_06591 YP_001014486.1 ABC transporter BAC0441 Protein 4e-44 48
NATL1_06591 YP_001014486.1 ABC transporter BAC0352 Protein 1e-41 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NATL1_06591 YP_001014486.1 ABC transporter VFG0527 Protein 1e-50 49
NATL1_06591 YP_001014486.1 ABC transporter VFG0528 Protein 1e-41 47