|
Name : rplS (NATL1_05311) Accession : YP_001014358.1 Strain : Prochlorococcus marinus NATL1A Genome accession: NC_008819 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 482086 - 482574 bp Length : 489 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGTCCGTCGATTCGAAAGAGCCCTCATCAGAAGAGGTAAAAATTGAAGATGAATCAAATGCTTCAGAGGACTCTGGGGT AAAAACAGCTTCTGAAAACAAATCTAAAGGAAAGAAAATTTCAATTAAGAATCTCTCTCCTGCAGAAATAATAAAGACTT TTGAAGATGCGCAACTAGGCAAAGATCTCCCTGATATTTACGTTGGAGATACCGTTCGTGTTGGTGTCCGAATTAGTGAG GGCAATAAGGAGAGGGTGCAGCCCTATGAGGGAGTTGTAATAGCAAAGAGACATGGAGGAATTCATCAAACAATTACCGT AAGGAGAATTTTCCAAGGAATAGGAGTTGAGAGAATTTTTCTGGTTCACAGTCCACAAGTTGCATCGATTAAGGTTGAGC GCCGAGGTAAAGTAAGAAGAGCGAAGCTTTTCTATCTGCGTGAGCGAGTAGGCAAAGCCACACGCGTCAAGCAGCGCTTC GACCGCTGA Protein sequence : MSVDSKEPSSEEVKIEDESNASEDSGVKTASENKSKGKKISIKNLSPAEIIKTFEDAQLGKDLPDIYVGDTVRVGVRISE GNKERVQPYEGVVIAKRHGGIHQTITVRRIFQGIGVERIFLVHSPQVASIKVERRGKVRRAKLFYLRERVGKATRVKQRF DR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 4e-26 | 53 |
