|
Name : thiC (NATL1_20631) Accession : YP_001015883.1 Strain : Prochlorococcus marinus NATL1A Genome accession: NC_008819 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1708157 - 1709557 bp Length : 1401 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGCGGAATTCATGGGTGGCTTCGAGAAAAGGTAAAACCAATGTTTCTCAGATGCATTTTGCTCGCAAAGGCGAAATTAC TGAAGAAATGAGGTATGTGGCAAAGCGTGAGAATCTTCCTGAGTCTCTGGTTATGGAAGAAGTCGCGCGCGGTCGAATGA TTATTCCTGCAAATATTAACCATATAAACTTAGAGCCGATGGCAATAGGTATTGCCTCAACATGTAAAGTCAATGCAAAT ATTGGTGCTTCACCAAATGCAAGCGATATCAGTGAAGAATTAAAGAAGCTTGATCTAGCAGTAAAATATGGGGCTGATAC TCTTATGGATCTTTCTACTGGAGGGGTTAATTTAGATGAGGTGCGAACTGAAATTATCAATGCCTCCCCTATCCCGATAG GGACAGTTCCTGTTTATCAAGCTTTAGAGAGTGTTCACGGTTCTATTTCAAGGTTAAATGAGGATGATTTTTTACACATT ATAGAAAAGCATTGTCAGCAGGGAGTTGATTATCAAACCATTCATGCAGGCTTATTGATTGAACATTTACCCAAGGTTAA AGGTCGTATTACTGGAATAGTTAGTCGTGGCGGAGGAATTCTTGCCCAATGGATGCTTTATCACTACAAACAAAATCCTT TGTTTACTCGTTTTGATGATATTTGTGAAATTTTTAAACGCTATGACTGCACCTTTTCTTTAGGTGACTCTCTAAGGCCT GGATGTCTGCATGATGCATCAGATGAAGCTCAACTCGCTGAGTTGAAAACTCTAGGTGAATTGACTAGACGTGCTTGGAA GCATGATGTTCAAGTCATGGTTGAAGGGCCTGGTCATGTACCTATGGATCAAATCGAATTCAATGTTAGGAAGCAAATGG AGGAGTGTTCAGAAGCTCCCTTTTATGTTCTAGGTCCATTGGTAACAGATATTTCTCCTGGTTATGATCACATTTCAAGT GCTATTGGTGCAGCCATGGCAGGTTGGTACGGGACTGCGATGCTTTGTTATGTAACACCTAAGGAACATCTTGGGTTGCC TAATCCTGAGGATGTTAGAGAAGGTTTAATTGCTTATAAAATTGCTGCTCATGCCGCAGATGTCGCAAGACATAGATCAG GAGCACGTGATCGTGATGATGAATTAAGTAAGGCTCGTAAAGAATTTGACTGGAACAAACAGTTTGAATTGTCCTTAGAT CCAGAAAAAGCTAAGCAATATCATGACGAAACTTTACCTGAAGAAATTTTCAAGAAAGCAGAGTTTTGTTCAATGTGTGG TCCTAATCATTGTCCAATGAATACAAAAATCACAGATGAAGATCTTGATCAATTAAACGATCAAATACAGTCAAAAGGTG CAGCTGAATTAACTCCAGTAAAGTTAAACAAAGAAAACTAG Protein sequence : MRNSWVASRKGKTNVSQMHFARKGEITEEMRYVAKRENLPESLVMEEVARGRMIIPANINHINLEPMAIGIASTCKVNAN IGASPNASDISEELKKLDLAVKYGADTLMDLSTGGVNLDEVRTEIINASPIPIGTVPVYQALESVHGSISRLNEDDFLHI IEKHCQQGVDYQTIHAGLLIEHLPKVKGRITGIVSRGGGILAQWMLYHYKQNPLFTRFDDICEIFKRYDCTFSLGDSLRP GCLHDASDEAQLAELKTLGELTRRAWKHDVQVMVEGPGHVPMDQIEFNVRKQMEECSEAPFYVLGPLVTDISPGYDHISS AIGAAMAGWYGTAMLCYVTPKEHLGLPNPEDVREGLIAYKIAAHAADVARHRSGARDRDDELSKARKEFDWNKQFELSLD PEKAKQYHDETLPEEIFKKAEFCSMCGPNHCPMNTKITDEDLDQLNDQIQSKGAAELTPVKLNKEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 1e-122 | 59 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 1e-122 | 59 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 1e-117 | 54 |
