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Name : clpC (NATL1_14921) Accession : YP_001015314.1 Strain : Prochlorococcus marinus NATL1A Genome accession: NC_008819 Putative virulence/resistance : Virulence Product : ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.92 Position : 1202270 - 1204837 bp Length : 2568 bp Strand : + Note : COG542 ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones] DNA sequence : ATGTTTGAGAGGTTTACAGAAAAGGCTATAAAAGTGATCATGCTTGCTCAAGAAGAGGCAAGACGCCTTGGGCATAATTT CGTCGGAACAGAACAAATCCTTCTTGGACTAATTGGTGAAGGTACTGGCGTAGCAGCTAAAGTTCTTAAATCAATGGGTG TCAACCTAAAAGATTCAAGAGTAGAAGTTGAAAAGATAATAGGAAGAGGCTCAGGATTCGTTGCCGTAGAAATTCCCTTC ACACCAAGAGCAAAAAGAGTACTTGAACTTTCATTAGAAGAAGCTCGTCAACTTGGTCACAATTACATTGGTACTGAACA TCTATTACTTGGTCTAATAAGAGAAGGTGAAGGAGTAGCGGCAAGAGTTCTAGAAAATTTAGGCGTTGATCTCACAAAAG TCAGGACCCAAGTTGTCAGAATGCTTGGTGAAACTGCAGAAGTTACAACAGGATCAGGTTCATCTAAAGGATCAGCAAAA ACAGCAACACTTGACGAATTTGGAACAAACCTAACTCAGCTAGCTAGTGAATCAAAGCTTGACCCAGTAGTGGGCAGACA TTCAGAGATTGATCGTGTAATTCAAATACTTGGAAGAAGAACAAAAAACAATCCTGTTTTAATTGGAGAGCCAGGAGTAG GGAAAACTGCCATAGCCGAAGGACTTGCTCAGAGAATTCAACAAGGAAATATTCCTGACATACTTGAGGAGAAGAGAGTA TTGACCCTTGATATTGGTTTACTTGTTGCAGGCACCAAATATAGAGGTGAATTTGAAGAAAGACTAAAGAAAATAATGGA AGAGATCAAATCAGCTGGAAATGTAATTCTAGTTATTGATGAAGTTCATACCTTGATAGGCGCAGGTGCTGCTGAGGGAG CAATTGACGCTGCAAACATTTTAAAACCTGCTTTAGCAAGAGGAGAACTCCAATGTATTGGAGCTACAACTCTTGATGAA TATCGCAAACATATTGAAAGAGATGCTGCATTAGAGCGAAGATTCCAACCTGTAATGATTGGAGAACCTTCAATTAAAGA CACTATCGAAATACTTAAAGGATTAAGAGAGAGATATGAACAACATCACAGATTAAAGATTACGGATGAAGCTCTTGATG CTGCTGCTAATCTTGGTGATAGGTATATTTCTGATCGTTTTTTACCTGATAAAGCTATAGACCTTATAGATGAAGCAGGA AGCCGAGTCAGATTACTCAACTCCAAATTGCCTCCTGAAGCAAAAGAAGTTGATAAAGAATTAAGAAAAATACAAAAGAG TAAAGAAGAAGCTGTAAGAGATCAAAATTTCACCCAAGCAGGAGAGCTCAGAGAAAAAGAAGTTGAGCTTAGAGATAAGA TAAGAAATCTTTTGCAAAATATAAGACAAAAACCATCATCAAATGAAAATCCCGATTCAAATAATGTTCCACAGGAAAAT AATCAAGCTTCCGACCAAGTTATTAATCAATCCGACGACTTAAAAGTTTCCCAACCGGTAGTTAACGAAGAAGACATTGC TCATATTGTTGCTTCATGGACTGGCGTTCCTGTTCAGAAATTAACTGAAAGTGAATCAGTCAAACTTCTAAATATGGAAG ATACATTGCATCAGAGACTGATTGGTCAAGACGAAGCTGTAAAAGCTGTTTCAAAAGCAATTAGGAGAGCAAGAGTAGGC CTAAAGAATCCAAACAGACCAATTGCTAGCTTTATTTTTTCTGGTCCAACGGGAGTTGGAAAAACTGAATTAACTAAAGC TTTAGCAGCCTATTTCTTTGGTAGTGAAGAAGCAATGATACGTTTAGACATGTCTGAATTCATGGAAAGACATACTGTTA GTAAATTAATAGGTTCTCCTCCAGGCTACGTAGGTTTCAATGAAGGTGGACAACTAACAGAAGCCGTAAGAAGAAGACCC TATACAGTAGTTTTGTTCGATGAAATAGAAAAAGCTCATCCAGATGTGTTCAATCTTCTCCTTCAATTACTGGAAGAAGG AAGATTAACAGACTCAAAAGGAAGAACTGTTGATTTCAAAAATACTCTAATAATAATGACCTCTAATATTGGATCTAAAG TTATAGAGAAAGGCGGAGGCGGATTGGGATTTGAATTCTCTGGTGAAAATTTAGAAGATACTCAATATAATCGAATTAAA TCATTAGTAAATGAAGAACTAAAACAATATTTCCGCCCTGAATTCCTCAATAGATTAGATGAAATAATTGTATTTAGACA GCTTTCCAGAGACGAAGTCAAAGACATCGCAGAAATAATGTTGAAAGAAGTATTCTCGAGAATAAAAGATAAAGGGATAT CATTAACTGTTTCAGAGGATTTCAAAGAAAGATTAGTTGAAGAAGGATACAATCCTTCTTATGGTGCAAGGCCTTTAAGA AGAGCGGTCATGAGGTTATTGGAAGATAGCCTTGCCGAAGAAGTTTTATCAGGAAGGATAAAAGACGGAGACAAAGCGGA GGTGGATATTGATGAAAGCAAGAAAGTAATTGTTAAACATCTTGGGAAAGATGGTTCCAAACCAGAATTAGCAAGCGCCA CTGTTTAA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDSRVEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLTKVRTQVVRMLGETAEVTTGSGSSKGSAK TATLDEFGTNLTQLASESKLDPVVGRHSEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGNIPDILEEKRV LTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDE YRKHIERDAALERRFQPVMIGEPSIKDTIEILKGLRERYEQHHRLKITDEALDAAANLGDRYISDRFLPDKAIDLIDEAG SRVRLLNSKLPPEAKEVDKELRKIQKSKEEAVRDQNFTQAGELREKEVELRDKIRNLLQNIRQKPSSNENPDSNNVPQEN NQASDQVINQSDDLKVSQPVVNEEDIAHIVASWTGVPVQKLTESESVKLLNMEDTLHQRLIGQDEAVKAVSKAIRRARVG LKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRP YTVVLFDEIEKAHPDVFNLLLQLLEEGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENLEDTQYNRIK SLVNEELKQYFRPEFLNRLDEIIVFRQLSRDEVKDIAEIMLKEVFSRIKDKGISLTVSEDFKERLVEEGYNPSYGARPLR RAVMRLLEDSLAEEVLSGRIKDGDKAEVDIDESKKVIVKHLGKDGSKPELASATV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001015314.1 | ClpC | VFG0079 | Protein | 0.0 | 57 |
| clpC | YP_001015314.1 | ClpC | VFG0080 | Protein | 3e-144 | 51 |
