Gene Information

Name : phoB (NATL1_11471)
Accession : YP_001014970.1
Strain : Prochlorococcus marinus NATL1A
Genome accession: NC_008819
Putative virulence/resistance : Virulence
Product : two-component response regulator, phosphate
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : 3.1.1.61
Position : 1023632 - 1024369 bp
Length : 738 bp
Strand : +
Note : COG745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]

DNA sequence : 
GTGACCAGTCCTGTCTCTGACAAGATATCCAAGGCTAAAAGACTACTTATCGTTGAAGACGATAAGAGCATTCGCGAAAC
GCTCCGTGAAGCTCTTGTTGCAGAGGGTTATCAAGTCGAGGTTTGCAAGACTGGTGATGAAGCTGAGGCTAGAGTTTTCT
CTCAGTTCGACACACGTAAAAAGATTGATTTAATTGTTTTAGACTTAATGTTACCCAACCTGAATGGAATAGAGCTTTGT
AGAAGAGTCCGAAAAAACAATATAAAAACACCTATTCTTATTGTCAGCGCAAAAGACAGTGAATCTGATCGTGTATTGGG
ATTAGAAGTTGGAGCTGACGATTATTTGATAAAGCCTTTTGGCTTAAATGAACTAATTGCAAGGTGTCGAGCAATTCTCA
GAAGATCTGAAACTAATCATGAGAAAACTCAAGATTTATCCCAAGTCCTTAGCTACAAAAATATATCCTTATACAGACAG
GAATACAGGGTCACAAAAAACAGTAAGGAAATAAATCTTGCCCCTAAGGAATACAAAATCATGGAATTGTTCCTGCAGAA
TCCAAAGCGGGTGTGGAGTCGTGATCAACTTTTAGAACAAATTTGGGGGATTGATTATGTGGGGGATTCTAAAACTGTAG
ATGTACATATTAGGTGGATTAGAGAAAAAATAGAGGATGATGCATCGGATCCAGACTATATAAGAACCGTTAGAGGTTTT
GGCTACAAATTTGGGTAA

Protein sequence : 
MTSPVSDKISKAKRLLIVEDDKSIRETLREALVAEGYQVEVCKTGDEAEARVFSQFDTRKKIDLIVLDLMLPNLNGIELC
RRVRKNNIKTPILIVSAKDSESDRVLGLEVGADDYLIKPFGLNELIARCRAILRRSETNHEKTQDLSQVLSYKNISLYRQ
EYRVTKNSKEINLAPKEYKIMELFLQNPKRVWSRDQLLEQIWGIDYVGDSKTVDVHIRWIREKIEDDASDPDYIRTVRGF
GYKFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_001014970.1 two-component response regulator, phosphate AE016830.1.gene1681. Protein 5e-43 43
phoB YP_001014970.1 two-component response regulator, phosphate NC_012469.1.7685629. Protein 5e-41 42
phoB YP_001014970.1 two-component response regulator, phosphate BAC0487 Protein 2e-25 41
phoB YP_001014970.1 two-component response regulator, phosphate NC_012469.1.7686381. Protein 1e-44 41
phoB YP_001014970.1 two-component response regulator, phosphate HE999704.1.gene2815. Protein 2e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_001014970.1 two-component response regulator, phosphate VFG1563 Protein 8e-38 41