Gene Information

Name : Hbut_1032 (Hbut_1032)
Accession : YP_001013221.1
Strain : Hyperthermus butylicus DSM 5456
Genome accession: NC_008818
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1045059 - 1046066 bp
Length : 1008 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
TTGAAGCTGATCGACTCGTATGCCGTGCTTGAGAAGATTCGAGACTTGATATACAGCCTTCTAGAGGCCCGTGATAGGGC
TATGGAGAATGGGTTGGAAGTTATACCTGTTCGCACTGCTACACCACTAGTACGCTATGGCTTTATCTCCATGCTTAAAG
GGGGCGTAGTAATGGATGTAACCAATGAACAGCAAGCCGAGATAGCCGAAGATGCTGGTGCGGTTGGAGTCATGGTTCTA
GACAAGCTTCCATATGATGTGAGGAAGGCGGGAGGCGTGGCTAGGACGGCTGACCTCAACGTTATACGAGCCGTTATGGA
GACTATTACGATACCTGTTTCCGCCAAGTGTAGGATAGGCCACTACTGGGAGGCAAAGCTGCTTGAGGAGATAGGTGTCG
ACCTTATAGATGAGAGTGAAGTCCTCACACCTACTGATGAGAAGGCCCATATATGGAAGTGGGAATTCCGTGTCCCATTT
GTCAACGGTGCAAGGTCTCTTCCGGAGGCTCTGAGAAGGATATGGGAAGGTGCCTCCATGATAAGGACTAAGGGTGAAGC
TGGAACCGGTAATGTGGCCGAGGCAGTTAGGCACATGAAAGCTGTAAATCGCGACATAGCAGTGCTTAGAGGCTACTATA
AAGCTGGGGATATCGAAGCCATAAGGCTCTACGCGAAGAGTAATAACGTTCCATTTGAGCTAGCCTTGCTAACAGCTAGG
CTTGGCAGGCTTCCAGTGGTAAACTTTGCTGCCGGAGGGATAGCCACCCCTGCCGATGCTGCTCTAATGATGTGGCTTGG
TGCAGACGGCGTCTTCGTGGGCTCAGGGATATTCAAGAGCCGTGATCCTGAACAGAGGGCACAAGCGATAGTCCTAGCGA
CGACATACTGGGACGACCCCGAGACTGTTGCGGAAGCCCAGTCGATGGTTTCAGAGAGGAACGCGATGCCGGGTATAGAC
ATTACTAGGCTCAAGCCCGAAGAGCTGTTGCAGATTAGAGGTGAGTAG

Protein sequence :
MKLIDSYAVLEKIRDLIYSLLEARDRAMENGLEVIPVRTATPLVRYGFISMLKGGVVMDVTNEQQAEIAEDAGAVGVMVL
DKLPYDVRKAGGVARTADLNVIRAVMETITIPVSAKCRIGHYWEAKLLEEIGVDLIDESEVLTPTDEKAHIWKWEFRVPF
VNGARSLPEALRRIWEGASMIRTKGEAGTGNVAEAVRHMKAVNRDIAVLRGYYKAGDIEAIRLYAKSNNVPFELALLTAR
LGRLPVVNFAAGGIATPADAALMMWLGADGVFVGSGIFKSRDPEQRAQAIVLATTYWDDPETVAEAQSMVSERNAMPGID
ITRLKPEELLQIRGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-59 54
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 6e-59 53
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-59 53