Gene Information

Name : P9515_06681 (P9515_06681)
Accession : YP_001010984.1
Strain : Prochlorococcus marinus MIT 9515
Genome accession: NC_008817
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 603871 - 604743 bp
Length : 873 bp
Strand : +
Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]

DNA sequence :
ATGGATCTATGTTTTTTATCTATAAATATAAATTCTTTTATCGTAGATCCATTAAGTCATGAATTTATGAGAAAAGCACT
ATTGATGAGCTCTTTAGTCGCTGCTGTTTGTGGTTTTTTATCTAGTTATTTAACTCTTAAAGGTTGGGCTTTAATGGGAG
ATGCCGTTTCTCACTCTGTAATGCCTGGTGTGGTTGTCGCGTATGCTTTGGGACTCCCTTTCTCCTTAGGGGCATTCATT
TTTGGCGTAGGTTCTGTAGCTTTAATAGGATTTGTAAAACAAAAGTCGAGAGTGAAAGAAGATACAGTTATTGGTTTAGT
TTTCACAGGCTTTTTTGCACTTGGAATAGTTTTAGTTTCAAAGATTAAAAGTAATATTGATCTTCATTCAATTCTTTTTG
GGAGCCCTCTAGGTATCTCTCTATCAGATGTTAAACAAACTGTATTTATTTCTTTATTGGTGGTACTACTATTATCAGTC
TTTAGAAAGGACTTAATCCTTTATTGTTTTGATCCAAGACACGCAAAAACAGTAGGAATTAATGTATTATTTCTTCATTA
TTTATTACTCACATGCTTGTCTTTAGCTGCTGTAGTTGGATTACAAACCGTTGGGATAGTTTTGGTCGTTGCTATGCTGA
TAACTCCTGGTGCAACAGCATATTTATTAACAGATAAGTTTGATATTATGACCATTATTTCAGTAATTAGCGCCATCATT
TCAAGTTTACTAGGGATCTATTTTAGCTTTTGGTTCGATCTTGAAACCGGTGGCTCAATTGTCTTGGTTCAAACGTTTAT
ATTTTTATTTGCTTTTTTGTTTGCTCCAAGATATGGGTTATTCAAAATTAGAAAAATATTTTCTAATTATTAA

Protein sequence :
MDLCFLSININSFIVDPLSHEFMRKALLMSSLVAAVCGFLSSYLTLKGWALMGDAVSHSVMPGVVVAYALGLPFSLGAFI
FGVGSVALIGFVKQKSRVKEDTVIGLVFTGFFALGIVLVSKIKSNIDLHSILFGSPLGISLSDVKQTVFISLLVVLLLSV
FRKDLILYCFDPRHAKTVGINVLFLHYLLLTCLSLAAVVGLQTVGIVLVVAMLITPGATAYLLTDKFDIMTIISVISAII
SSLLGIYFSFWFDLETGGSIVLVQTFIFLFAFLFAPRYGLFKIRKIFSNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-49 44
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-49 44
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-49 44
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-49 44
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-49 44
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 6e-46 44
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-46 44
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 6e-46 44
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-46 44
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-46 44
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 1e-42 42
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 7e-43 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P9515_06681 YP_001010984.1 ABC transporter BAC0441 Protein 3e-48 47
P9515_06681 YP_001010984.1 ABC transporter BAC0442 Protein 8e-54 46
P9515_06681 YP_001010984.1 ABC transporter BAC0351 Protein 1e-49 44
P9515_06681 YP_001010984.1 ABC transporter BAC0352 Protein 2e-46 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P9515_06681 YP_001010984.1 ABC transporter VFG0527 Protein 9e-50 44
P9515_06681 YP_001010984.1 ABC transporter VFG0528 Protein 1e-46 44