|
Name : thiC (P9515_17991) Accession : YP_001012113.1 Strain : Prochlorococcus marinus MIT 9515 Genome accession: NC_008817 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1585928 - 1587298 bp Length : 1371 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAGAAATTCTTGGATAAAGCCTCGCCTTGGACAAAAAAATATTACTCAGATGAATTTTGCTAAAAATGGAATTATAAC TGAAGAAATGAACTATGTTGCTCAAAAAGAGAACCTTCCATCTTCATTAATTATGGAAGAAGTTGCAAGGGGCAGATTAA TAATTCCAGCTAATATAAATCATGTAAATCTTGAACCAATGGCGATTGGTATTGCTTCTAAATGCAAAGTAAATGCAAAT ATTGGTGCTTCCCCCAATGCAAGTGATATAAATGAAGAAGTTGAGAAGCTTAGGTTAGCGGTCAAATATGGTGCTGATAC AGTTATGGATTTATCTACGGGTGGAGTAAATCTTGATGAGGTGAGACAAGCAATTATCAAAGAATCTTCTGTCCCTATTG GTACTGTTCCAGTTTATCAAGCTTTAGAAAGTGTTCATGGATCTATAGACAGATTAACAGAAGACGATTTCTTACATATT ATTGAAAAACATTGTCAGCAAGGAGTTGATTATCAAACGATTCATGCTGGTTTATTAATAGAACATTTACCTAAAGTAAA AGGAAGAATTACTGGCATCGTTAGTCGAGGTGGAGGAATTCTTGCTCAATGGATGTTGCATCATTTTAAGCAAAACCCCT TGTATACAAGATTTGATGATATTTGTGAAATTTTCAAAAAATATGATTGTACTTTCTCTTTAGGAGATTCACTTAGACCG GGATGTTTACATGATGCATCAGATGATGCTCAATTAGCTGAATTGAAAACATTGGGTGAGCTTACAAGAAGAGCTTGGGC TCATAATGTTCAGGTTATGGTGGAAGGTCCAGGGCATGTCCCTATGGATCAAATTGAGTTTAATGTTCGAAAACAGATGG AAGAATGTTCAGAAGCTCCTTTTTATGTCCTAGGACCATTAGTAACTGATATCTCTCCTGGCTATGATCATATTTCAAGT GCTATCGGCGCTGCAATGGCAGGATGGTACGGAACTGCGATGTTATGTTATGTCACTCCTAAAGAGCATTTGGGTCTCCC AAATGCTGAAGATGTAAGAGAGGGGTTAATAGCCTATAAAATCGCTGCACATGCAGCAGATATCGCTAGGCATAGAGCGG GGGCTCGTGATAGAGATGATGAGCTAAGTCACGCAAGATATACTTTTGACTGGAATAAACAGTTTGAACTTTCTTTAGAT CCTGAAAGGGCTAAACAATATCATGATGAAACTTTACCAGAAGAAATATTTAAAAAAGCTGAGTTCTGTTCAATGTGTGG TCCTAAGCATTGCCCCATGAATTCAAAAATTTCTGATGAAACACTTGATCAATTGAATAATAAACTCGCAAAATGTGACA TTAAAGTTTAG Protein sequence : MRNSWIKPRLGQKNITQMNFAKNGIITEEMNYVAQKENLPSSLIMEEVARGRLIIPANINHVNLEPMAIGIASKCKVNAN IGASPNASDINEEVEKLRLAVKYGADTVMDLSTGGVNLDEVRQAIIKESSVPIGTVPVYQALESVHGSIDRLTEDDFLHI IEKHCQQGVDYQTIHAGLLIEHLPKVKGRITGIVSRGGGILAQWMLHHFKQNPLYTRFDDICEIFKKYDCTFSLGDSLRP GCLHDASDDAQLAELKTLGELTRRAWAHNVQVMVEGPGHVPMDQIEFNVRKQMEECSEAPFYVLGPLVTDISPGYDHISS AIGAAMAGWYGTAMLCYVTPKEHLGLPNAEDVREGLIAYKIAAHAADIARHRAGARDRDDELSHARYTFDWNKQFELSLD PERAKQYHDETLPEEIFKKAEFCSMCGPKHCPMNSKISDETLDQLNNKLAKCDIKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 9e-119 | 58 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 9e-119 | 58 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 5e-113 | 55 |
