|
Name : tktA (P9515_17981) Accession : YP_001012112.1 Strain : Prochlorococcus marinus MIT 9515 Genome accession: NC_008817 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1583914 - 1585920 bp Length : 2007 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGGTCGCTGCATCTGTTTCATTAGAATCTTTATGTGTCAATAGTATAAGAATGTTAGCTGTAGATGCAGTAAATAAATC TAATAGTGGGCATCCCGGTTTACCGATGGGTTGCGCTCCTATGGGTTATGCATTATGGCAAAATATTCTTAATCACAATC CCAATAATCCAAAGTGGTTCAATAGAGATCGGTTTGTATTATCTGCGGGACATGGATGTATGTTGCTTTATTCCCTATTG CATCTAACTGGGTATAAATCAGTTTCCATTGAAGATATCAAGGAATTTAGACAATGGGGGTCTAAAACACCCGGGCATCC AGAAACATTTGAGACTGAGGGGGTTGAAGTAACAGCAGGACCATTAGGTGCGGGGATTTCTAATGCAGTTGGTTTAGCAA TTGCTGAAACCCACTTAGCCGCAAAATTTAACAAGCCAGACTGTGAAATTGTTGATCATTACACTTACGTCATAATGGGC GACGGATGTAATCAGGAGGGTATTGCATCAGAAGCATGTTCACTTGCTGGACATCTTAAGCTTGGCAAATTAATTGCTTT GTATGATGATAATCAAATCACAATTGATGGACGTACAGATGTTTCATTTACAGAAGATGTTTTAAAAAGATATGAAGCGT ATGGATGGCATGTTCAACATGTTGAAGATGGCAATCATGATGTACAAGGAATTACCAAAGCGATTGAAAGTGCTAAATCT GTAAAAGATAAACCTTCTCTAATCAAAATTTCTACAACGATAGGTTATGGGTCTCCAAATAAATCTGATACTGCAGGTAT TCATGGCGCTGCTGTAGGCGAAGAAGAAGCTTCTTTGACTAGAGAGTTTTTAAATTGGGAATACCCTCCTTTTGAAATCC CTGATGAAGTTTATACCCAATTCAGACAAGCTATTACAAAAGGTGAAGAATCTGAGAAAGAATGGAATTTAAAATTCAAG GGTTATCAAAATTCATATCCTTCTGAAGGTAATGAATTAAAAAGAATGATACAAGGTGATTTACCAGAGAATTGGGACTC AGACCTGCCTTCATATACTCCGGACGATAAGGGTTTAGCAACAAGAAAACATTCTCAAATATGCTTGGGAGCTCTTGGCC CTAATCTACCTGAATTAATTGGAGGGTCTGCTGATTTAACACACTCAAATTACACAGACATAAAAGGAGAAACAGGCTCA TTTCAGGCACATTCTCCAGAAAAGAGATATTTACATTTTGGTGTAAGAGAGCATGCCATGGCAGCAATATTAAATGGAAT TGCTTATCACGACAGTGGACTAATACCTTATGGAGGTACTTTTCTCGTTTTTGCAGATTACATGAGAGGTTCAATGAGAC TTTCTGCTCTCAGTGAACTTGGTGTTATTTATGTACTTACTCATGATTCAATTGGAGTAGGCGAAGATGGTCCAACACAT CAACCTGTCGAAACCATTCCTTCTCTTAGAGCAATGCCAAATATGCTAGTTTTTAGACCAGGAGATGGTAATGAAACTAG TGGTGCTTATAAGATTGCTATTAAAAACAGAAAAAGGCCTTCAGCACTCTGCTTAAGTAGACAAGCCATGCCTAATCAAG AGAACACCTCTATTGAAAAAGTTGCATTAGGTGGATACATAGTTTCCGATTGTGAAGGGACTCCTGAAGTAATATTTATC GGTACTGGTAGTGAACTAAATTTGTGCATTGAGGCAAGTAAAGAAATCTCAAAATCAGGGACAAAAACAAGAGTTATTTC AATGCCATGCGTAGAGCTATTTGAAGAGCAGGATCCCTCTTACAAAGAAAGTATTTTACCTAGCAGTGTCAAAAAAAGAG TTGTAGTTGAAGCAGCACATTCATTCGGATGGCATAAATATACTGGACTTGATGGCATTTGTATAACTATGGATAGATTT GGTGCCTCTGCTCCTGGCGGAAAATGTATGACCAGTTTCGGATTTACAGTTGAAAATGTTATAAATAAAACTAGAGAAAT TTTATAG Protein sequence : MVAASVSLESLCVNSIRMLAVDAVNKSNSGHPGLPMGCAPMGYALWQNILNHNPNNPKWFNRDRFVLSAGHGCMLLYSLL HLTGYKSVSIEDIKEFRQWGSKTPGHPETFETEGVEVTAGPLGAGISNAVGLAIAETHLAAKFNKPDCEIVDHYTYVIMG DGCNQEGIASEACSLAGHLKLGKLIALYDDNQITIDGRTDVSFTEDVLKRYEAYGWHVQHVEDGNHDVQGITKAIESAKS VKDKPSLIKISTTIGYGSPNKSDTAGIHGAAVGEEEASLTREFLNWEYPPFEIPDEVYTQFRQAITKGEESEKEWNLKFK GYQNSYPSEGNELKRMIQGDLPENWDSDLPSYTPDDKGLATRKHSQICLGALGPNLPELIGGSADLTHSNYTDIKGETGS FQAHSPEKRYLHFGVREHAMAAILNGIAYHDSGLIPYGGTFLVFADYMRGSMRLSALSELGVIYVLTHDSIGVGEDGPTH QPVETIPSLRAMPNMLVFRPGDGNETSGAYKIAIKNRKRPSALCLSRQAMPNQENTSIEKVALGGYIVSDCEGTPEVIFI GTGSELNLCIEASKEISKSGTKTRVISMPCVELFEEQDPSYKESILPSSVKKRVVVEAAHSFGWHKYTGLDGICITMDRF GASAPGGKCMTSFGFTVENVINKTREIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 3e-162 | 51 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 7e-163 | 51 |
