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Name : clpC (P9515_11791) Accession : YP_001011493.1 Strain : Prochlorococcus marinus MIT 9515 Genome accession: NC_008817 Putative virulence/resistance : Virulence Product : ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.92 Position : 1034484 - 1037015 bp Length : 2532 bp Strand : - Note : COG542 ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones] DNA sequence : ATGTTCGAAAGATTTACAGAAAAAGCCATAAAAGTCATTATGCTTGCCCAAGAGGAAGCTAGAAGGCTTGGACATAATTT TGTTGGAACAGAACAAATATTACTAGGCTTAATTGGTGAAGGTACTGGCGTTGCAGCTAAGGTGCTTAAATCACTAGGAG TAAATCTTAAGGACTCAAGAATAGAAGTTGAAAAAATTATAGGAAGAGGTTCGGGTTTCGTTGCAGTTGAGATTCCTTTT ACTCCAAGAGCAAAAAGAGTATTGGAGTTGTCTCTCGAAGAAGCTCGTCAATTAGGACATAACTATATAGGCACCGAACA CCTACTTCTTGGTTTAATCAGGGAAGGCGAAGGTGTGGCTGCAAGAGTTTTAGAAAATCTAGGAATTGATCTGACAAAAG TCAGAACCCAGGTTATAAGAATGCTTGGAGAGACCGCTGACGTTGGTACAGGTGGGACTTCATCAAATAAAGGAAATTTA AAGACAGCAACTCTCGATGAATTCGGAACGAATTTAACAAAGCTTGCAAGTGAATCAAAACTTGATCCAGTTGTCGGACG TTATGAGGAAATAGATAGAGTTATTCAAATCTTAGGTAGGAGAACTAAAAACAATCCTGTGCTTATTGGTGAACCAGGAG TAGGTAAAACAGCTATAGCAGAAGGTTTAGCTCAAAGAATTCAACTTGGAGAAATTCCTGACATACTTGAAGATAAAAGG GTTTTAACCCTTGATATAGGACTTCTTGTTGCAGGAACAAAATATAGAGGTGAATTTGAAGAGAGATTAAAAAAAATAAT GGAAGAGATCAAATCAGCTGGAAACGTTATTCTGGTTATTGATGAAGTCCATACTTTAATCGGAGCCGGAGCTGCTGAAG GTGCTATCGATGCCGCTAACATATTAAAGCCAGCTTTAGCTAGAGGAGAACTCCAATGCATAGGAGCTACAACTTTGGAT GAATATAGAAAGCATATAGAAAGAGATGCAGCGCTGGAAAGAAGATTCCAACCGGTGATGGTGGGAGAGCCATCTATTGA AGATACAATCGAAATTTTGAAAGGTTTAAGAGAACGTTACGAACAACATCATCGTTTAAAAATTACTGATGATGCTTTAG AAGCAGCCGCTCATTTAGGTGATCGTTATATATCGGATAGATTTTTACCTGATAAGGCCATTGATCTTATAGATGAAGCA GGAAGTAGAGTAAGATTAATAAATTCTAAGCTTCCTCCCGAAGCCAAACAAATTGATAAGGAATTAAGACAAGTTCAAAA ACAAAAAGAAGAATCAGTAAGAGATCAAAATTTTGATCAAGCAGGTCAGTTAAGGGAAAAGGAAATTGAATTGTCTGAAA AAATTAAAGAGCTTTTAGATAGTAAAAAAGAGAGCTTAGATAAAAATAATTCAAGTAATGCTTCGGAAACTGAAGACGGT GGCATTGATATTACTCAAAACCCTCTTGTAAGTGAAGAAGATGTGGCTCATATAGTGGCTTCATGGACAGGTGTTCCTGT TCAGAAATTAACAGAAACCGAGTCAGTCAAACTCCTTAATATGGAAGAGACATTGCATCAAAGACTTATAGGCCAAGATG AGGCTGTAAAAGCAGTATCAAAAGCCATTAGAAGAGCTAGGGTCGGTTTGAAAAATCCTAATAGACCAATCGCAAGCTTT ATTTTTTCAGGCCCTACTGGTGTTGGGAAAACTGAATTAACTAAATCATTAGCATCATATTTCTTTGGTAGTGAGGAAGC TATGATTAGATTAGATATGTCTGAATTTATGGAAAGACATACTGTTAGTAAGTTAATCGGTTCCCCTCCCGGATATGTTG GTTTCAACGAAGGGGGTCAACTTACAGAGGCTGTAAGAAGAAGACCATACACTGTAGTTTTATTCGATGAAGTGGAGAAA GCTCATCCAGATGTTTTTAATTTGTTATTACAACTTCTTGAAGATGGTAGATTAACAGACTCAAAGGGTAGAACAGTTGA TTTTAAAAATACGCTTTTAATAATGACTTCTAATATTGGCTCTAAAGTTATCGAGAAAGGTGGCGGTGGTTTAGGTTTTG AATTTTCCGGCGATTCCGTTGAAGATAGCCAATACAATAGGATCAAATCTCTTGTAAACGAGGAACTAAAACAATACTTT AGACCTGAGTTTTTAAACAGACTTGACGAGATAATTGTATTCAGACAATTAACTAAAAACGAAGTTAAAGACATCGCAGA AATAATGTTAAAAGAAGTATTCTCTCGATTAAATGAAAAGGGTATAAAATTAGATGTTACTGAAGCATTTAAAGAAAGAC TTGTTGAAGAGGGATATAATCCAGCCTATGGAGCAAGACCTTTAAGAAGAGCAGTCATGCGCTTATTAGAAGATAGTTTG GCTGAAGAAGTTTTATCAGGAAGAATTAAAGATGGAGACAAAGCTTTAGTCGATATTGATGAAAATAAGAAAGTTACAGT AAATATTTCCTCAGAAGAATCTTCTCAAGAATTAGCAGGAGCTAATTTTTAA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSRIEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGIDLTKVRTQVIRMLGETADVGTGGTSSNKGNL KTATLDEFGTNLTKLASESKLDPVVGRYEEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQLGEIPDILEDKR VLTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD EYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHRLKITDDALEAAAHLGDRYISDRFLPDKAIDLIDEA GSRVRLINSKLPPEAKQIDKELRQVQKQKEESVRDQNFDQAGQLREKEIELSEKIKELLDSKKESLDKNNSSNASETEDG GIDITQNPLVSEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSKAIRRARVGLKNPNRPIASF IFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEK AHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYF RPEFLNRLDEIIVFRQLTKNEVKDIAEIMLKEVFSRLNEKGIKLDVTEAFKERLVEEGYNPAYGARPLRRAVMRLLEDSL AEEVLSGRIKDGDKALVDIDENKKVTVNISSEESSQELAGANF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001011493.1 | ClpC | VFG0079 | Protein | 0.0 | 58 |
| clpC | YP_001011493.1 | ClpC | VFG0080 | Protein | 2e-148 | 49 |
