Gene Information

Name : A9601_06591 (A9601_06591)
Accession : YP_001009052.1
Strain : Prochlorococcus marinus AS9601
Genome accession: NC_008816
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 582747 - 583619 bp
Length : 873 bp
Strand : +
Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]

DNA sequence :
ATGGAGCTCTATTCTTTTTTAACTTTAGATTCATTTATAACAGATCCTTTGACTCATGACTTTATGAGAAAAGCACTCTT
TATGAGTTCATTAGTTGCAGCTGTTTGTGGTTTCCTATCAAGTTATTTGACTCTTAAAGGATGGGCTTTAATGGGAGATG
CAGTGTCACATTCGGTAATGCCTGGTGTCGTTGTGGCTTATGCATTAGGTCTTCCTTTCTCATTGGGGGCATTTATTTTC
GGAGTTGGTTCTGTAGCTTTGATAGGGTTTATTAAACAGAAATCTAGAGTTAAGGAAGATACTGTTATTGGGTTGGTATT
TACAGGATTTTTCGCTCTTGGAATTGTATTGGTTTCTAAGATTAAAAGTAATATTGATCTACACTCTATTCTTTTTGGTA
GTCCATTAGGAATATCACTTTCAGATGTAAAACAAACTATATTTATTTCTATATTGGTAGTAATCCTTTTATCAGTTTTT
AGAAAAGATTTAATGCTTTATTGCTTTGATCCTAGGCATGCAAAAACAGTTGGGATTAACGTATTTTTTCTTCATTATTT
ACTCCTCACATGCCTATCTTTGGCTGCAGTTGTGGGTTTGCAGTCTGTTGGAATTATTTTGGTAGTTGCAATGTTGATTA
CACCAGGGGCTACAGCATATTTACTTACGGATAAGTTCGATAATATGACAGTAATTTCAGTATTAAGTGCAATTATCTCA
AGCCTGATAGGAATATATGTTAGTTTTTGGTTTGATCTTGAAACAGGTGGATCAATTGTTTTGGCACAAACTTTTATATT
TTTATTTGCTTTTTTATTCGCTCCGAGATACGGAATATTTAAGTTAAAGAAATTATTTGCTGGGTATAAATGA

Protein sequence :
MELYSFLTLDSFITDPLTHDFMRKALFMSSLVAAVCGFLSSYLTLKGWALMGDAVSHSVMPGVVVAYALGLPFSLGAFIF
GVGSVALIGFIKQKSRVKEDTVIGLVFTGFFALGIVLVSKIKSNIDLHSILFGSPLGISLSDVKQTIFISILVVILLSVF
RKDLMLYCFDPRHAKTVGINVFFLHYLLLTCLSLAAVVGLQSVGIILVVAMLITPGATAYLLTDKFDNMTVISVLSAIIS
SLIGIYVSFWFDLETGGSIVLAQTFIFLFAFLFAPRYGIFKLKKLFAGYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-46 45
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 6e-46 45
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 6e-46 45
sitD NP_461785.1 permease Virulence SPI-1 Protein 4e-46 45
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-46 45
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 6e-43 43
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 5e-43 43
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-48 42
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-48 42
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-48 42
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-48 42
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-48 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A9601_06591 YP_001009052.1 ABC transporter BAC0442 Protein 5e-54 47
A9601_06591 YP_001009052.1 ABC transporter BAC0441 Protein 5e-47 46
A9601_06591 YP_001009052.1 ABC transporter BAC0352 Protein 2e-46 45
A9601_06591 YP_001009052.1 ABC transporter BAC0351 Protein 1e-48 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A9601_06591 YP_001009052.1 ABC transporter VFG0528 Protein 2e-46 45
A9601_06591 YP_001009052.1 ABC transporter VFG0527 Protein 1e-48 42