Gene Information

Name : thiC (A9601_18211)
Accession : YP_001010211.1
Strain : Prochlorococcus marinus AS9601
Genome accession: NC_008816
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1554194 - 1555564 bp
Length : 1371 bp
Strand : -
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGAGAAGTTCTTGGATTAAGCCTCGCCTAGGGAAAGACAATGTAACTCAGATGAACTTTGCGAGAAATGGATATATCAC
TGAAGAAATGGATTTTGTTGCTAAAAAAGAGAATCTTCCTTCTTCTTTAATAATGGAAGAAGTAGCAAGAGGAAGATTAA
TTATTCCAGCTAATATTAATCATTTGAATCTTGAGCCAATGTCTATAGGTATTGCTTCAAGATGCAAAGTTAATGCCAAT
ATTGGTGCTTCCCCTAACGCAAGTGATATCAATGAAGAAGTAGAAAAGCTCAAACTTGCTGTTAAATATGGTGCTGATAC
GGTTATGGATCTTTCTACGGGAGGAGTAAATTTAGATGAAGTCCGACAAGCAATTATTCAAGAATCTCCTGTTCCCATCG
GAACTGTTCCTGTTTATCAAGCTTTAGAAAGTGTTCATGGTTCAATAGATAGACTAACAGAAGATGATTTTCTTCATATT
ATTGAAAAACATTGTCAGCAGGGCGTAGATTATCAAACTATTCATGCTGGTCTATTAATAGAGCATTTGCCAAAAGTTAA
AGGAAGAATTACTGGAATTGTCAGTAGAGGGGGAGGTATTTTAGCCCAATGGATGTTACATCATTTTAAACAAAATCCTC
TTTACACAAGGTTTGATGATATCTGTGAGATTTTCAAGAAATATGATTGTACTTTCTCTCTCGGAGATTCGCTTAGGCCT
GGATGTTTGCATGATGCTTCTGATGATGCTCAGCTAGCTGAATTGAAGACCTTAGGCGAGCTTACTCGAAGAGCATGGGA
ACATAATGTTCAAGTAATGGTTGAAGGTCCTGGTCATGTCCCTATGGATCAAATTGAGTTTAATGTGAGAAAGCAAATGG
AAGAATGTTCAGAAGCCCCTTTCTATGTACTTGGTCCATTAGTAACAGATATTTCTCCTGGTTATGACCATATATCAAGT
GCTATTGGGGCGGCAATGGCGGGGTGGTATGGAACTTCGATGCTATGTTATGTAACCCCAAAAGAACATCTAGGCCTTCC
AAATGCAGAAGATGTAAGAGAAGGATTAATTGCTTATAAAATAGCTGCTCACGCTGCTGATATAGCAAGACATAGAGCTG
GAGCTCGTGATCGAGATGATGAACTTAGTCATGCAAGGTATAACTTTGATTGGAATAAACAATTCGAACTTTCTTTAGAT
CCGGAAAGGGCAAAGCAGTACCATGATGAAACATTGCCTGAAGAGATCTTTAAAAAGGCTGAGTTTTGTTCAATGTGTGG
CCCAAAACATTGTCCAATGAATTCAAAGATTTCAGATGAATCACTAGATCAACTAAAAGATAAACTTGAAGAATGTAATA
CTTCAGTTTAG

Protein sequence :
MRSSWIKPRLGKDNVTQMNFARNGYITEEMDFVAKKENLPSSLIMEEVARGRLIIPANINHLNLEPMSIGIASRCKVNAN
IGASPNASDINEEVEKLKLAVKYGADTVMDLSTGGVNLDEVRQAIIQESPVPIGTVPVYQALESVHGSIDRLTEDDFLHI
IEKHCQQGVDYQTIHAGLLIEHLPKVKGRITGIVSRGGGILAQWMLHHFKQNPLYTRFDDICEIFKKYDCTFSLGDSLRP
GCLHDASDDAQLAELKTLGELTRRAWEHNVQVMVEGPGHVPMDQIEFNVRKQMEECSEAPFYVLGPLVTDISPGYDHISS
AIGAAMAGWYGTSMLCYVTPKEHLGLPNAEDVREGLIAYKIAAHAADIARHRAGARDRDDELSHARYNFDWNKQFELSLD
PERAKQYHDETLPEEIFKKAEFCSMCGPKHCPMNSKISDESLDQLKDKLEECNTSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 5e-118 57
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 5e-118 57
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 2e-113 55