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Name : clpC (A9601_11941) Accession : YP_001009585.1 Strain : Prochlorococcus marinus AS9601 Genome accession: NC_008816 Putative virulence/resistance : Virulence Product : ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.92 Position : 1009566 - 1012094 bp Length : 2529 bp Strand : - Note : COG542 ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones] DNA sequence : ATGTTTGAAAGATTTACTGAAAAAGCTATAAAAGTCATTATGCTTGCTCAAGAGGAAGCTAGAAGACTTGGTCATAATTT CGTTGGAACTGAACAAATTCTTTTGGGATTAATTGGAGAAGGAACTGGGGTTGCAGCGAAAGTACTTAAATCACTTGGAG TCAATTTAAAAGATTCAAGGATAGAAGTAGAGAAGATAATAGGGAGAGGGTCAGGATTTGTAGCTGTAGAAATACCTTTT ACCCCTAGGGCTAAGAGAGTTTTAGAATTATCTCTCGAAGAGGCTCGCCAACTAGGTCACAATTACATAGGAACAGAACA TTTATTATTAGGTTTAATAAGAGAAGGCGAGGGAGTAGCTGCAAGAGTTTTGGAAAATCTTAATATTGACCTTACCAAAG TAAGAACTCAAGTCATCAGGATGCTAGGCGAAACAGCCGAAGTTGGTTCAGGAACTAGTACAACTAAGAGTAACCAGAAA ACTGCTACTCTTGATGAATTTGGTACAAACCTAACAAAACTAGCTAGTGAATCAAAATTAGATCCTGTCGTTGGCCGTTA TTCAGAAATAGATCGTGTCGTTCAAATATTAGGTAGGAGGACCAAAAATAATCCTGTTCTTATAGGGGAGCCAGGTGTAG GTAAAACAGCTATCGCAGAAGGTTTAGCTCAAAGAATACAAACAGGCGATATTCCAGACATTCTTGAAGACAAAAGAGTT TTGACACTTGATATAGGATTATTAGTCGCAGGAACAAAATATAGAGGTGAATTTGAAGAAAGGTTAAAAAAAATAATGGA AGAAATTAAATCAGCAGGTAATGTCATACTCGTCATTGATGAGGTGCATACTTTAATTGGTGCTGGAGCTGCTGAAGGAG CTATAGACGCAGCAAATATTCTGAAGCCAGCACTAGCTAGAGGAGAACTTCAATGTATTGGAGCAACAACTCTCGATGAA TATAGAAAACATATCGAAAGAGACGCCGCTCTGGAAAGACGATTCCAGCCTGTAATGGTAGGGGAGCCATCTATTGAAGA TACAATAGAGATATTAAAAGGCCTCAGAGAGCGTTACGAGCAACATCATCGTCTAAAAATTACTGATGATGCGCTAGAAG CAGCAGCTCATTTAGGGGATCGTTACATATCTGATAGGTATTTACCTGATAAGGCTATAGACCTCATCGACGAGGCTGGA AGTAGAGTTCGTCTAATAAATTCTAAACTCCCGCCTGAAGCAAAACAAATAGATAAAGAACTAAGACAAGTTCAAAAACA GAAGGAAGAATCTGTAAGAGATCAAAATTTTGATCAAGCTGGCCAATTACGTGAAAAAGAGATTGAATTGTCTGCAAAAA TTAAAGAGGTATTGGAAAATAAAAAAGAATCTGCAGAGGAAGATCAATTTAATGATGATAATAAGTCTGTTGAAAGTGAT TCAAAACTCTATCAAAGTCCCCTTGTTAGTGAAGAGGATGTAGCACATATTGTAGCTTCATGGACAGGCGTTCCTGTTCA AAAATTAACAGAAACCGAATCAGTAAAACTTCTTAATATGGAGGAAACACTTCACCAAAGGTTAATTGGACAGGATGAAG CTGTAAAGGCTGTTTCTAGAGCTATAAGAAGAGCAAGAGTTGGTCTAAAAAATCCTAATAGACCCATTGCAAGTTTTATC TTTTCTGGCCCTACTGGTGTAGGTAAAACTGAATTAACTAAATCATTAGCTTCATATTTCTTCGGTAGTGAAGAAGCAAT GATTAGGTTAGATATGTCAGAATTTATGGAAAGACATACAGTTAGTAAACTTATAGGTTCGCCTCCTGGATATGTTGGTT TTAATGAAGGAGGTCAGCTTACTGAGGCAGTTAGAAGACGTCCTTATACAGTTGTTTTATTTGATGAAGTTGAAAAGGCG CATCCAGATGTATTCAATTTATTATTGCAACTACTTGAAGATGGAAGATTAACTGACTCTAAGGGTAGAACCGTAGATTT TAAAAATACTTTGTTAATAATGACTTCTAATATCGGTTCTAAAGTAATTGAGAAAGGGGGGGGCGGACTCGGATTTGAAT TCTCAGGAGATTCAGTTGAAGATAGCCAATACAATAGAATAAAATCTTTAGTTAATGAAGAACTTAAGCAATACTTTAGG CCTGAATTTTTAAATAGACTTGATGAAATAATTGTATTCAGACAACTAACTAAAAATGAAGTTAAACACATTGCTGAAAT AATGTTGCAAGAAGTTTTTGCACGACTACAAGATAAAGGCATTAAGTTAGATGTAACCGATGCTTTTAAAGAAAGACTTG TTGAAGAAGGTTATAATCCTTCCTACGGTGCGAGACCTTTGAGAAGGGCAGTCATGCGTTTACTTGAAGATAGTTTGGCT GAAGAAGTTCTTTCTGGGAGGATAAAAGATGGAGATAAGGCTTTAGTTGATATAGATGATAATAAAAAAGTTATAATAAA CATATCTTCTGAAGAATCTTCTCAAGAACTAGCAAGTGCTAACTTCTAA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSRIEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLNIDLTKVRTQVIRMLGETAEVGSGTSTTKSNQK TATLDEFGTNLTKLASESKLDPVVGRYSEIDRVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDKRV LTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDE YRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHRLKITDDALEAAAHLGDRYISDRYLPDKAIDLIDEAG SRVRLINSKLPPEAKQIDKELRQVQKQKEESVRDQNFDQAGQLREKEIELSAKIKEVLENKKESAEEDQFNDDNKSVESD SKLYQSPLVSEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASFI FSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKA HPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFR PEFLNRLDEIIVFRQLTKNEVKHIAEIMLQEVFARLQDKGIKLDVTDAFKERLVEEGYNPSYGARPLRRAVMRLLEDSLA EEVLSGRIKDGDKALVDIDDNKKVIINISSEESSQELASANF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001009585.1 | ClpC | VFG0079 | Protein | 0.0 | 59 |
| clpC | YP_001009585.1 | ClpC | VFG0080 | Protein | 9e-150 | 48 |
