Gene Information

Name : nrdE (YE0927)
Accession : YP_001005265.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Unknown
Product : ribonucleotide-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : 1.17.4.1
Position : 1055214 - 1057295 bp
Length : 2082 bp
Strand : -
Note : Catalyzes the rate-limiting step in dNTP synthesis

DNA sequence :
ATGTTGAACCTCTATGATGCCGATGGGCGTATCCAGTTTGATAAAGACCGCCAGGCGGCACGGCAATATTTCTTGCAACA
CGTCAATCAAAACACCGTGTTCTTCCATAATTTGCAGGAAAAACTCAATTATCTGGTTGAAGAAGGATACTACGAGAAAG
ACGTGCTGGAAAAGTATGACTTCAGCTTTATCAAGAGCTTATTCCAACAAGCCTATAGTAAAAAGTTTCGCTTCCCGACC
TTCCTTGGCGCGTTTAAGTACTACACCAGCTATACCCTGAAAACTTTTGATGGCAAACGCTATCTGGAACGCTATGAAGA
CCGAGTTTGCATGGTCGCCCTGACATTAGCTGCGGGTAATCAGCAAGTTGCGCGAGATTTAGTCGAAGAGATCATCACTG
GCCGTTTCCAACCCGCCACGCCAACCTTCCTCAATTGCGGCAAGAAACAGCGCGGTGAGCTGGTCTCCTGCTTCCTGCTG
CGCATTGAAGACAATATGGAGTCGATAGGTCGCGCCATAAACTCAGCACTGCAATTATCTAAACGCGGCGGTGGCGTGGC
TTTCCTGCTTAGCAATATTCGTGAAGTGGGCGCGCCGATTAAACGTATTGAAAATCAGTCATCTGGCGTTATTCCCATCA
TGAAAATGCTGGAAGATGCTTTTTCCTATGCCAATCAACTGGGTGCTCGCCAAGGTGCAGGAGCGGTCTATCTCCATGCC
CATCACCCCGATATTTTGCGTTTTCTCGATACCAAACGCGAAAATGCCGATGAAAAAATACGGATTAAAACCCTGTCACT
GGGGGTGGTTATCCCCGATATTACTTTTGAGTTGGCGAAGAATAATGAAGACATGTACCTGTTTTCGCCTTATGACGTAG
AACAGGTTTACGGCGTTCCTCTGTCGGAAATCAGTGTCAGTGAAAAATACCGCGAGATGGTCGATAATAAGCGCATCCGT
AAAAGCAAAATTAAAGCGCGCGAGTTTTTCCAGATACTGGCAGAGATCCAATTTGAGTCCGGTTATCCCTATATGATGTT
TGAGGATACCGTGAATCGGGCTAACCCGATCAAAGGCCGGATTAATATGAGTAACCTGTGCTCGGAAATTTTGCAGGTTA
ATTCACCCACTGAATACAACGACGACCTCAGCTATCGCCATATTGGGAAGGATATCTCCTGTAATCTCGGTTCGCTGAAT
ATCGCCCACATCATGGATTCACCAGACTTTGGTAAATCGATTGAAACCGCCATTCGCGGGCTGACTGCCGTGTCCGATAT
GAGCAACATCCGCTCAGTGCCGTCAATTGAAAAAGGTAATCAGGAATCCCATGCCATTGGCCTCGGGCAGATGAATCTGC
ACGGCTACCTGGCACGGGAACGTATCTTCTATGGCTCAGAAGAAGCGCTGGATTTCACCAATATCTATTTCTATACCGTG
GCATATCACGCCATCCGCGCCTCTAACCAGCTGGCGATAGAACGCGGCAGTCACTTTAAAGGTTTCGACCAATCGACTTA
TGCTTCGGGTCACTATTTCACCAAATATATTGAGCAAAGCTGGCAACCTAAAACAGCTAAAGTTAGTGCGCTATTTGCCC
AAGCGGGTATTTCCGTTCCGGATCAACAAGATTGGGCAGCACTGCGCCAGTCCGTGATGGAGCACGGGATTTATAATCAG
AACTTACAAGCGGTGCCTCCGACGGGATCTATTTCATATATCAATCACTCAACCTCCAGCATCCACCCGATTGTCTCTCC
AATCGAGATCCGCAAAGAAGGCAAGATTGGCCGGGTGTATTATCCAGCGCCTTATATGACCAACGATAATCTTGAATATT
ATCAGGATGCTTATCAAATCGGGCCGGAGAAAATCATCGATACCTATGCCGAAGCGACCCAGCATGTCGATCAGGGGCTG
TCACTGACGCTGTTTTTCCGCGATACCGCCACTACCCGCGATATTAATAAAGCGCAGATATATGCCTGGAAGAAAGGGAT
TAAAACCATTTATTACATCCGGCTGCGCCAGATGGCGCTTGAGGGGACGGAAGTTGAAGGCTGTGTTTCCTGTTCGCTGT
AA

Protein sequence :
MLNLYDADGRIQFDKDRQAARQYFLQHVNQNTVFFHNLQEKLNYLVEEGYYEKDVLEKYDFSFIKSLFQQAYSKKFRFPT
FLGAFKYYTSYTLKTFDGKRYLERYEDRVCMVALTLAAGNQQVARDLVEEIITGRFQPATPTFLNCGKKQRGELVSCFLL
RIEDNMESIGRAINSALQLSKRGGGVAFLLSNIREVGAPIKRIENQSSGVIPIMKMLEDAFSYANQLGARQGAGAVYLHA
HHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKNNEDMYLFSPYDVEQVYGVPLSEISVSEKYREMVDNKRIR
KSKIKAREFFQILAEIQFESGYPYMMFEDTVNRANPIKGRINMSNLCSEILQVNSPTEYNDDLSYRHIGKDISCNLGSLN
IAHIMDSPDFGKSIETAIRGLTAVSDMSNIRSVPSIEKGNQESHAIGLGQMNLHGYLARERIFYGSEEALDFTNIYFYTV
AYHAIRASNQLAIERGSHFKGFDQSTYASGHYFTKYIEQSWQPKTAKVSALFAQAGISVPDQQDWAALRQSVMEHGIYNQ
NLQAVPPTGSISYINHSTSSIHPIVSPIEIRKEGKIGRVYYPAPYMTNDNLEYYQDAYQIGPEKIIDTYAEATQHVDQGL
SLTLFFRDTATTRDINKAQIYAWKKGIKTIYYIRLRQMALEGTEVEGCVSCSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 77