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Name : clpB (YE0893) Accession : YP_001005234.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Virulence Product : protein disaggregation chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1016096 - 1018669 bp Length : 2574 bp Strand : + Note : - DNA sequence : ATGCGTCTGGATCGTCTTACTAGCAAATTCCAGCTTGCCCTCGCCGATGCCCAATCTTTAGCTCTTGGGCGCGACAACCA ATTTATTGAACCGTTACATTTGATGAGCGCACTGCTCAATCAGGATGGGGGGACGGTTCGCCCATTGTTGACCTCGGCGG GTATTAATGTCGCCAGTTTGCGCAGCGACATTGAGCAAGCATTAGGTCGTCTTCCACAAGTTGAAGGGACTGGCGGTGAT GTTCAGCCATCAAATGAGCTAGTCCGTGTATTGAATCTTTGCGACAAATTAGCGCAAAAACGTGCAGATAAATTTATTTC GTCAGAACTGTTTGTTCTGGCCGTACTTGAAGATCGCGGTACTTTAACTGACATGTTAAAGGCAGCCGGAGCAACAAAAG ATAAAATAAATAAGGCAATAGAAGATATGCGTGGTGGTGACAAAGTTGATGACCAAGGTGCTGAAGACCAGCGTCAGGCA TTGAAAAAATTCACTATCGACCTGACTGAGCGGGCGGAGCAAGGCAAGCTCGATCCGGTTATTGGCCGTGACGAAGAGAT TCGCCGTACTATTCAGGTACTACAGCGCCGGACTAAAAATAACCCGGTGTTAATTGGTGAACCTGGTGTTGGTAAAACAG CCATTGTTGAAGGTCTGGCGCAACGAATCGTGAATGGTGAAGTGCCAGAAGGCCTGAAGCATAAACGTGTGCTTTCATTA GATATGGGCGCACTAATTGCAGGTGCGAAGTATCGTGGTGAGTTTGAAGAGCGCTTGAAAGGCGTGTTGAATGATTTATC AAAACAAGAAGGTAGTGTGATCTTGTTCATTGATGAGTTGCATACCATGGTCGGTGCCGGGAAAGGCGACGGGGCGATGG ATGCCGGCAACATGCTGAAACCTGCATTAGCACGCGGTGAATTACATTGCGTTGGTGCCACAACACTTGATGAGTACCGT CAATATATAGAGAAGGATGCGGCGCTAGAGCGGCGTTTCCAGAAAGTGTATGTTGCGGAGCCAACTGTTGAAGACACTAT CGCCATTTTACGCGGGCTGAAAGAGCGCTATGAACTGCATCACCATGTGCAGATAACTGACCCAGCAATTGTGGCTGCGG CAACGCTATCGCACCGCTATATCTCGGATCGTCAGTTACCGGATAAAGCTATCGACCTTATTGACGAGGCCGGTTCTAGT ATCCGTATGCAGATGGATTCAAAACCGGAATCGTTGGATCGCCTGGAGCGCCGGATTATCCAATTGAAGCTGGAACAGCA GGCATTGAAGAAAGAATCTGATGATGCCAGCAAAAAACGTCTGGAAATGCTCAATACCGAATTAGAGCAAAAAGAACGTG AATATTCAGAGCTGGAAGAAGAGTGGAAGGCAGAAAAAGCTGCCCTCACCGGAACTCAGAATATTAAAACTGAACTGGAA CAAGCCAAAATCAGCTTAGAGCAAGCTCGTCGTGTGGGCGATTTGGCGCGGATGTCAGAACTTCAGTACGGTAAAATTCC TGAGCTGGAAAAACAGCTAGCAGCGGCAACGGCGCTTGAAGGGAAAACCATGAAGTTACTGCGTAACCGGGTGACGGAAG CAGAAATTGCGGAAGTGCTGGCGCGCTGGACGGGTATTCCTGTATCTCGCATGCTGGAAAGTGAGCGTGATAAGTTGCTG CGCATGGAACAGGATCTACATAAACGCGTGATTGGGCAGGATGAAGCTGTTGAAGCCGTATCCAATGCTATCCGCCGTAG TCGTGCTGGGTTATCAGATCCGAACCGCCCAATTGGTTCCTTCTTATTCTTAGGGCCAACAGGGGTTGGTAAAACCGAGT TGTGTAAAGCGCTGGCAACCTTCCTGTTCGACAGTGATGATGCCATGGTGCGTATTGATATGTCCGAGTTTATGGAAAAA CATTCCGTTTCTCGGTTGGTTGGTGCGCCTCCAGGCTACGTGGGTTATGAAGAAGGTGGTTACCTGACAGAAGCGGTGCG CCGTCGCCCTTATTCTGTCATTCTGCTGGATGAGGTAGAAAAAGCGCATCCGGATGTATTCAACATTCTTTTACAGGTGT TGGATGACGGGCGTTTGACTGACGGGCAGGGTAGAACAGTCGACTTCCGTAATACGGTGGTCATCATGACCTCTAACCTC GGTTCAGATTTGATTCAGGAACGTTTCGGTGAAAGAAGTTATAGCGAAATGAAGGAAATGGTGATGGAAGTTGTCACTCA CCACTTCCGCCCTGAATTTATCAACCGTATAGATGAGGTTGTGGTCTTCCACCCACTGGGCCGAGCGCATCTGGCTTCAA TTGCCAGTATCCAACTGGAGCGCCTGTACAAACGGTTGGAAGAACGTGGCTATCAGGTCACTATTACTCAGCCTGCGTTG GAGTTCTTGGGCGAGACTGGCTTCGATCCTGTTTATGGTGCGCGGCCATTGAAACGTGCAATCCAGCAGGAAATCGAGAA TCCACTGGCGCAACAGATACTTTCCGGCAAATTAATACCGGGAGTCCCTGTTACTCTTGATGTGGAAAATGGGCATATCA TTGCTAAACAGTAA Protein sequence : MRLDRLTSKFQLALADAQSLALGRDNQFIEPLHLMSALLNQDGGTVRPLLTSAGINVASLRSDIEQALGRLPQVEGTGGD VQPSNELVRVLNLCDKLAQKRADKFISSELFVLAVLEDRGTLTDMLKAAGATKDKINKAIEDMRGGDKVDDQGAEDQRQA LKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSL DMGALIAGAKYRGEFEERLKGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAGSS IRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKAALTGTQNIKTELE QAKISLEQARRVGDLARMSELQYGKIPELEKQLAAATALEGKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLESERDKLL RMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEK HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDLIQERFGERSYSEMKEMVMEVVTHHFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPAL EFLGETGFDPVYGARPLKRAIQQEIENPLAQQILSGKLIPGVPVTLDVENGHIIAKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-103 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001005234.1 | protein disaggregation chaperone | VFG0079 | Protein | 2e-134 | 44 |
