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Name : tnpB (YE0832) Accession : YP_001005170.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Unknown Product : IS1329 transposase B Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 957883 - 958632 bp Length : 750 bp Strand : + Note : Previously sequenced as Yersinia enterocolitica transposase B TnpB SWALL:Q9RIG3 (EMBL:AJ251581) (249 aa) fasta scores: E(): 2.3e-104, 99.59 38d in 249 aa. Also similar to Xanthomonas axonopodis pv. citri str. 306 ISxac3 transposase Xac0342 SWALL:AAM35234 DNA sequence : ATGATCAAGCCCGATGTTCTGATGTTGCACGCGGCGGCTAAGCATGTTCACGCTGAAATGGATGCCACATATGGCAGCCG GCGCATGTGCATCGAGTTACGGGAGCAAGGTTTTAACGTGGGCAGATACCGCGTTCGGCAGATAATGAAAAACTTATTAC TGGTAGCTAAACGACCTGGGCGTCATCGCTATCCACGCGGTGGAAAACCCGCTGTCGTGGCCGCTAATCTGTTGAACCGG CAGTTTAATCCAGAGACATTGAATACCTGGTGGTCAGGTGATATTACCTATCTGCATACCGCTCAGGGCTGGTTATATCT GGCTATCGTGATGGACTTATGTTCAAGAAAAATAGTGAGTTGGGCCTTCTCAGACAAACCGGACAGCGACTTGACTGTCC GGGCCTTAAGGCTGGCCGTAAATAAACGCCGACCCACAGGGTCAGTGGTGTTCCATAGCGATCAAGGGGCGCAATATACC AGCGCGCAGTTCCAGTCCTGCCAGCAAGAACTGGATGTTACAGGTAGTATGAGTCGAAAAGGTAACTGCCTGGATAATGC TGTTACGGAAAGGTTTTTCCGCAGCCTGAAAGCAGAGAGGGTTAACTATCGTCGTTATGAAACCCGAAGTCAGGGTATCG CTGATGTTATCGATTATATCGACAGCTTTTATAATCTGAAAAGGCGGCATTATCGGCTGGGAAATATATCGCCGGATGAA TATGAACGCCGATTACAACAATGTGCCTAA Protein sequence : MIKPDVLMLHAAAKHVHAEMDATYGSRRMCIELREQGFNVGRYRVRQIMKNLLLVAKRPGRHRYPRGGKPAVVAANLLNR QFNPETLNTWWSGDITYLHTAQGWLYLAIVMDLCSRKIVSWAFSDKPDSDLTVRALRLAVNKRRPTGSVVFHSDQGAQYT SAQFQSCQQELDVTGSMSRKGNCLDNAVTERFFRSLKAERVNYRRYETRSQGIADVIDYIDSFYNLKRRHYRLGNISPDE YERRLQQCA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 9e-115 | 99 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 1e-115 | 99 |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 1e-36 | 45 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 1e-36 | 45 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 1e-36 | 41 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 1e-36 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tnpB | YP_001005170.1 | IS1329 transposase B | VFG1484 | Protein | 7e-37 | 45 |
