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Name : mrfC (YE0781) Accession : YP_001005122.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Virulence Product : fimbrial outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 905480 - 908041 bp Length : 2562 bp Strand : + Note : - DNA sequence : ATGAGTAAGGTGACATATCTCATGGTATCCGCTCGTTCCATCACCTCCGGTTTTGCCCGTCGTGATTTATTGCGAATTTT GATTGTAGTTACATTAAGTGGCAATGCTTATGGTGTGTTGGCCAGCGATGACATTCAGTTTAATACCGATGTATTGGATA CCAAGGATCGCGCTAATTTTGACCTAAGCCAGTTCTCCCAACGCGGCTACATCATGCCTGGGAATTATAACTTGTTGGTT AGCATGAATAAGCAGGAGCTTAGTGAACAGCCGATTGTGTTCTACGCCTCAGAAAAAGATGCAAAAAAAAGTGAGGCGTG TTTAACACCCCAGTTAATCGAGTTGTTGGCATTGAAAGAGGATAGCTTCAAAAAGCTGACCTGGTCGCGTGATGGGGAGT GTCTGGATATTAGCAGCTTACCCGGCTTGACCGTGGAAGGTGATTTGGCAAAGTCATCGCTGTACTTGAGTGTGCCACAA GCTTGGCTGGAATACAGCGAACCGGATTGGGATCCTCCTTCTCGCTGGGAGGAGGGTATTCCCGGTGTGCTGTTCGATTA CAACTTGTTAGGGCAATTGAACCGCCAGGAAACGAATAATACCAATAACAATACGTTAAGCGGCAACGGGACCACTGGCG CTAATCTGGGTGCCTGGAGATTCCGTGCTGACTGGCAGATGCGTGTCGACCAATCATCGGCTTCATCGACTGAGCGCCAA TGGGATTGGAGCCGTTATTACGCTTATCGCGCTATCCCGAGTCTGGGAGCAAAGTTGACGTTGGGGGAAGATTTTTTGAA TTCCTCCATCTTTGACAGTTTCCGCTTTAACGGCGCTAGCCTGGCGACGGATGACAATATGTTACCGCCAAATTTACGTG GTTATGCCCCTGAAATTACAGGAGTTTCCCGTACCAATGCGCGGGTAGTTGTCAGTCAGCAAGGGCGTGTGTTGAGTGAA ACGCTGGTTGCTGCCGGCCCTTTTCGTATTCAGAACTTGAACAGTTTTGTCTCTGGGACGCTGGATGTGCGGGTAGAGGA ACTTGACGGGCAAGTTCAACAATTTCAAGTAAATACCGCCAGTATTCCTTACCTGACCCGCCCCGGAATGGTGCGTTACC GTATCGCTGCCGGTAAGCCTTCGGATATCGGGCATCGGGCGGAAGGGCCAGTGTTTGGCACCGGGGAATTCTCCTGGGGG ATCAACAGTGGCTGGTCACTGTTTGGTGGCGCGATGAGTGGTGAAAACGAATATCAAGCGGCATCTATGGGGATTGGCCG TGACTTAATGGAATTTGGTGCGGTGTCGGTTGATATGACCCAATCATGGGCAACGTTACCCGAGCAAGGCACTTTGAGCG GTGGCTCTTATCGAGTCAACTATTCGAAAAACTTTCAGGAAACAGGCAGTCAGGTGACGTTTGCTGGCTATCGCTTCTCT GAACGTAATTTTATGAGCATGAGTGAATATCTCGACGCGCGTTATCGCAGCAATGACGTGGGTGGCAATAAAGAGATGTA CACCATCAGCTTCAATCAACAATTTCAGGATCTGGGGCTGAGTGCGTATCTGAACTATAGCCATCAGACCTATTGGGATC GCTCGGCAAATGACCGCTATAACCTGGCTCTCTCGCGTTATTTTGATATCGGTAAAGTGAAAAATGTCAGTTTGACCTTC TCTGCTTACCGTAACCGCTATAACGAAAGCAATGACGATGGCGTGTATTTGTCTATGTCGATGCCATTTGGTAACAGCGC AACCATCAGTTATAGCGCGACGGTGAGTGGCAGTGAACATAGTCAGCGAGTGGGCTATACCGATCGTCTGGATGCTCACA ACAACTACCAGATCAATACTGGGGTAGCACGTAGCGGCGTGTTAGTTAGTGGTAACTACAACCACATAGGTAATAGTGCG GATATTAACGCCAATGCCAGTTATCAGGAGGGGCAATACTCTTCCGTTGGTTTAGGTATTCAGGGCGGCGCAACTATCAC GGCTGAAGGTGGTGCTCTACATCGGGTGAATACCCTCGGCGGTACCCGATTATTACTGGATACCCAAGGTGTATCTGGTG TTCCGGTTCAGGGATATGGCTCATCAATACGCACCAATCAGTTTGGTAAAGCGGTAGTCGGTGATGTGAATAGCTATTAC CGCAATCGGGCCAGTATTGATATCGATAACCTGGCTGACGATGTTGAAGCCAGAGGAACCGTAGCACAGGTCACACTGAC CGAAGGTGCTATTGGTTATCGCCGCTTTAATGTGATTTCCGGCGAAAAGGCGATGGCGATGATACGTATGGCAGATGGCA CATCACCGCCATTTGGGGCCACCGTATTAAATGAAAATCAGCAAGAGACCGGCATTGTTAACGACGATGGTTCCACTTAC CTCAGTGGGATCAAAGCGGGTGAAACCATGTCAGTACGTTGGAATGGTGAGGCGCAATGCAGCATCACCTTACCTAAGGC TCTTTCTCCAGCAATACTGGCGAATCTACTGTTGCCTTGCCAGCCAATAGCCACGGGGGATAAACCTCCGATATCACAGT AG Protein sequence : MSKVTYLMVSARSITSGFARRDLLRILIVVTLSGNAYGVLASDDIQFNTDVLDTKDRANFDLSQFSQRGYIMPGNYNLLV SMNKQELSEQPIVFYASEKDAKKSEACLTPQLIELLALKEDSFKKLTWSRDGECLDISSLPGLTVEGDLAKSSLYLSVPQ AWLEYSEPDWDPPSRWEEGIPGVLFDYNLLGQLNRQETNNTNNNTLSGNGTTGANLGAWRFRADWQMRVDQSSASSTERQ WDWSRYYAYRAIPSLGAKLTLGEDFLNSSIFDSFRFNGASLATDDNMLPPNLRGYAPEITGVSRTNARVVVSQQGRVLSE TLVAAGPFRIQNLNSFVSGTLDVRVEELDGQVQQFQVNTASIPYLTRPGMVRYRIAAGKPSDIGHRAEGPVFGTGEFSWG INSGWSLFGGAMSGENEYQAASMGIGRDLMEFGAVSVDMTQSWATLPEQGTLSGGSYRVNYSKNFQETGSQVTFAGYRFS ERNFMSMSEYLDARYRSNDVGGNKEMYTISFNQQFQDLGLSAYLNYSHQTYWDRSANDRYNLALSRYFDIGKVKNVSLTF SAYRNRYNESNDDGVYLSMSMPFGNSATISYSATVSGSEHSQRVGYTDRLDAHNNYQINTGVARSGVLVSGNYNHIGNSA DINANASYQEGQYSSVGLGIQGGATITAEGGALHRVNTLGGTRLLLDTQGVSGVPVQGYGSSIRTNQFGKAVVGDVNSYY RNRASIDIDNLADDVEARGTVAQVTLTEGAIGYRRFNVISGEKAMAMIRMADGTSPPFGATVLNENQQETGIVNDDGSTY LSGIKAGETMSVRWNGEAQCSITLPKALSPAILANLLLPCQPIATGDKPPISQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 3e-167 | 47 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 3e-166 | 47 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 2e-166 | 47 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 3e-167 | 47 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 4e-167 | 47 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 2e-167 | 47 |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 6e-175 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mrfC | YP_001005122.1 | fimbrial outer membrane usher protein | VFG1548 | Protein | 2e-167 | 47 |
| mrfC | YP_001005122.1 | fimbrial outer membrane usher protein | VFG0884 | Protein | 1e-167 | 47 |
| mrfC | YP_001005122.1 | fimbrial outer membrane usher protein | VFG0895 | Protein | 1e-167 | 47 |
