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Name : fdv (YE0776) Accession : YP_001005117.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 898643 - 901198 bp Length : 2556 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGAATAATACTGATAAGCTAGATTCCCACACCCCAATGATGCAGCAGTATCTTCGGCTTAAGGCCCAACATCCTGAAAT ACTCCTGTTTTATCGGATGGGGGATTTTTATGAGCTGTTCTACAGTGATGCCAAACGCGCGTCCCAGTTATTGGATATCT CACTGACAAAACGGGGGGCTTCCGCCGGTGAACCTATTCCTATGGCGGGTGTTCCCTATCATTCGATAGAAAACTATCTG GCAAAGCTGGTTCAATTGGGTGAGTCAGCGGCTATCTGTGAGCAAATCGGTGATCCGGCTACCAGCAAAGGGCCGGTTGA ACGTAAAGTCGTGCGAATAGTCACCCCCGGTACCGTGAGTGACGAGGCCTTACTGCAAGAGCGCCAGGATAATCTTCTGG CCGCCATCTGGCAGGATGCGCGCGGATTTGGTTATGCGACGCTGGATATCAGTTCAGGCCGCTTTAGAGTTGCAGAACCC GCAGACCTTGAAACTATGGCTGCCGAGTTACAACGAACCAATCCCGCAGAGTTACTTTATCCAGAAAACTTCGAGCAAAT GTCGTTGATCGAACATCGACATGGCTTACGCCGCCGCCCATTATGGGAGTTTGAGCTGGAAACAGCCAAACAGCAGTTAA ACCTGCAATTCGGCACCCGCGATTTAATCGGTTTTGGTGTCGAACAAGCCCATCAGGCACTGCGGGCTGCGGGCTGCCTG CTGCAATATGTCAAAGATACCCAGCGCACCTCCCTGCCCCATATCCGTGGCTTGACCATGGAGCGTCAGCAAGATGGCAT TGTTATGGATGCTGCGACCCGTCGTAATCTTGAACTGACGCAGAATTTATCAGGTGGAACGGAAAACACGCTGGCCGCGA TCCTCGATTGCACGGTAACCGCTATGGGCAGCCGCATGTTGAAACGCTGGCTGCATATGCCAATCCGTGACACCAAAGTG TTGACTGATCGCCAGCAAGCCATTGGTGGTCTGCAAGATATTACCGCTGAACTGCAAACTCCACTGCGTCAGGTCGGGGA TTTAGAACGTATTTTGGCACGACTGGCACTGCGAACCGCTCGCCCGAGAGATTTGGCAAGAATGCGGCATGCATTTCAGC AACTGCCTGAGATTCATCGTTTATTGCAGCCAGTGAATGTTCCCCATATCCAAAATTTACTGTCACAAGTCGGCCAGTTT GATGAATTACAAGATTTACTGGAACGCGCAATTGTTGAAACGCCGCCAGTATTGGTACGAGATGGTGGCGTCATCGCCTC TGGCTACAATGCAGAATTAGACGAATGGCGGGCGCTGGCTGATGGTGCAACCGATTATCTCGACCGGTTGGAAATCCGTG AACGCGAAAAACTGGGTCTGGATACCCTAAAAGTCGGTTTTAATGGTGTTCATGGCTATTACATTCAGGTTAGCCGTGGT CAGAGCCATCTGGTACCGATTCATTATGTTCGCAGGCAAACGTTGAAGAATGCCGAGCGCTACATCATTCCAGAGCTGAA AGAGTATGAAGACAAAGTTCTGACCTCGAAAGGCAAGGCTTTGGCGATTGAAAAAGGTTTGTACGAAGAAATTTTCGATC TGCTGTTGCCGCATCTACCTGAGTTACAAACCAGCGCCAATGCACTAGCCGAACTTGATGTTTTGGCGAATCTGGCCGAA AGAGCCGAAACACTCAACTACAACTGCCCTGTCCTGAGTGATAAACCGGGGATCAAAATTACTGGCGGCCGTCATCCGGT AGTGGAGCAGGTGCTCAGTGAGCCTTTTATTTCTAACCCGCTGACACTCTCACCTCAACGGCGAATGCTGATCATTACTG GCCCGAATATGGGCGGTAAAAGTACCTATATGCGCCAAACCGCATTGATAGTCTTACTGGCACATATGGGCAGCTATGTT CCTGCGGACCAAGCCACTATTGGGCCAGTTGACCGCATCTTTACTCGAGTCGGTGCTGCTGACGACCTGGCATCCGGTCG CTCAACCTTTATGGTCGAAATGACAGAAACGGCCAATATTCTGCATAATGCCACCGAACAAAGTTTGGTATTAATGGATG AAATTGGTCGCGGCACATCAACCTATGATGGCTTGTCATTAGCTTGGGCTTGCGCTGAAAATCTGGCTAGCCGTATCAAA GCCATGACGCTATTTGCTACTCATTACTTTGAGCTAACGACCCTGCCGGAAAAAATGGAGGGGGTGGTCAATGTTCATCT TGATGCATTGGAACATGGCGAAACCATCGCCTTTATGCACAGTGTGCAAGATGGTGCGGCGAGTAAAAGTTATGGTTTAG CTGTAGCGGCCTTGGCCGGAGTGCCACGGGATGTGATTAAACGCGCACGGCAAAAACTGAAAGAGCTGGAATCGTTGTCG AACAATGCAGCGGCAAGCAAAATTGATGGCTCGCAACTCACGTTGCTAAATGAAGAGGTATCGCCAGCAGTGGAAGCCTT AGAGGCATTGGATCCCGACTCCCTATCACCACGTCAGGCGCTTGAGTGGATTTATCGCCTGAAAAACATGGTGTAA Protein sequence : MNNTDKLDSHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYSDAKRASQLLDISLTKRGASAGEPIPMAGVPYHSIENYL AKLVQLGESAAICEQIGDPATSKGPVERKVVRIVTPGTVSDEALLQERQDNLLAAIWQDARGFGYATLDISSGRFRVAEP ADLETMAAELQRTNPAELLYPENFEQMSLIEHRHGLRRRPLWEFELETAKQQLNLQFGTRDLIGFGVEQAHQALRAAGCL LQYVKDTQRTSLPHIRGLTMERQQDGIVMDAATRRNLELTQNLSGGTENTLAAILDCTVTAMGSRMLKRWLHMPIRDTKV LTDRQQAIGGLQDITAELQTPLRQVGDLERILARLALRTARPRDLARMRHAFQQLPEIHRLLQPVNVPHIQNLLSQVGQF DELQDLLERAIVETPPVLVRDGGVIASGYNAELDEWRALADGATDYLDRLEIREREKLGLDTLKVGFNGVHGYYIQVSRG QSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALAIEKGLYEEIFDLLLPHLPELQTSANALAELDVLANLAE RAETLNYNCPVLSDKPGIKITGGRHPVVEQVLSEPFISNPLTLSPQRRMLIITGPNMGGKSTYMRQTALIVLLAHMGSYV PADQATIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLVLMDEIGRGTSTYDGLSLAWACAENLASRIK AMTLFATHYFELTTLPEKMEGVVNVHLDALEHGETIAFMHSVQDGAASKSYGLAVAALAGVPRDVIKRARQKLKELESLS NNAAASKIDGSQLTLLNEEVSPAVEALEALDPDSLSPRQALEWIYRLKNMV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 79 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fdv | YP_001005117.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 84 |
