Gene Information

Name : rph (YE0058)
Accession : YP_001004452.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 69277 - 69993 bp
Length : 717 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGTCCAGCAGACCGAGCAGCACAACAAGTCCGCCCATTGACCCTGACCCGTAATTACACGAAACACGCTGAAGGTTC
AGTGTTGGTTGAGTTTGGCGATACCAAAGTATTGTGCACCGCCACGGTTGAAGAGGGGGTTCCGCGCTTTCTGAAAGGCC
AAGGCCAGGGCTGGATAACCGCTGAATATGGTATGTTACCGCGCTCGACCCACAGCCGTAATGCGCGCGAAGCCGCAAAA
GGCAAACAAGGCGGCCGTACTTTAGAAATTCAACGTCTGATTGCTCGCTCTTTGCGTGCGGCAGTAGATTTGAAGAAGTT
AGGTGAATTCACCATCACTTTAGACTGCGATGTCTTGCAGGCGGATGGCGGCACTCGTACTGCCTCAATCAGTGGTGCTT
GTGTAGCTTTAGCCGACGCGCTGAATAAGCTGGTGGCCAGTGGTAAATTGAAAGCAAACCCAATGAAAGGGCTGGTTGCG
GCAGTTTCTGTTGGTATCGTTAAAGGCGAAGCCCTGTGCGATTTGGAATACGTAGAGGATTCTGCGGCAGAAACAGATAT
GAATGTGGTGATGATGGAAGATGGCCGAATGATTGAGGTGCAAGGCACCGCAGAAGGTGAACCGTTTAGCCATGAAGAGC
TATTGACGTTGTTGGCTCTGGCTCGGGGAGGGATAGAAACTATCTTCCAAGCGCAGAAAGCGGCGTTGGAACAATAA

Protein sequence :
MRPADRAAQQVRPLTLTRNYTKHAEGSVLVEFGDTKVLCTATVEEGVPRFLKGQGQGWITAEYGMLPRSTHSRNAREAAK
GKQGGRTLEIQRLIARSLRAAVDLKKLGEFTITLDCDVLQADGGTRTASISGACVALADALNKLVASGKLKANPMKGLVA
AVSVGIVKGEALCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEELLTLLALARGGIETIFQAQKAALEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-61 57