Gene Information

Name : b4052 (YE3849)
Accession : YP_001007997.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 4198141 - 4199547 bp
Length : 1407 bp
Strand : -
Note : unwinds double stranded DNA

DNA sequence :
ATGGCAGCAAAAAAACCAACCAACAATATGACAGAGCCACGCGATCGCCAGATGGAAGGGCTGAAACTTCCGCCTCATTC
TCTGGAGGCAGAGCAGTCCGTGTTGGGCGGTTTGATGCTGGATAACGAGCGCTGGGATAATGTCTCTGAGCGCGTAGCCA
GCAAGGACTTTTTCAGCCGCCCACATCGCCGAATCTTTACTGAAATGCAGCGTTTGCTGGAAAACAGCAAGCCAATCGAT
TTGATCACGCTTTCTGAGTCACTGGAACAAAAGGGTGATTTGGAGTCGGTAGGCGGTTTCGCCTATCTGGCAGAGTTATC
AAAAAACACGCCAAGTGCAGCGAATATCGGTGCTTATGCTGACATCGTTCGCGAACGTGCAGTAGTACGTGAAATGATCT
CGGTCGCGAATGAGATCGCCGATGCCGGTTATGATCCGCAAGGGCGTAGCAGTGAAGATCTGCTGGATCTGGCCGAATCG
AAGGTGTTTCAGATTGCCGAAAGCCGTGCCAATAAAGATGAAGGGCCGAAAAGTGTCGATCAGATCCTCGAAGCCACTGT
GGCGCGTATCGAGCAGCTCTATCAGCGGCCACATGATGGCGTTACCGGGGTTTCAACCGGTTTTACCGATTTGGATAAGA
AAACAGCTGGCTTGCAGAAGTCAGATTTGATTATTGTCGCCGCGCGCCCGTCGATGGGGAAAACCACCTTTGCGATGAAC
CTGTGCGAAAACGCCGCGATGATGCAGGAAAAACCAGTATTGATCTTCAGTCTGGAGATGCCAGGCGATCAGATCATGAT
GCGTATGTTGGCGTCATTGTCCCATGTTGATCAGACGCGTATCCGTACCGGTCAGCTTGATGATGAGGATTGGGCACGGA
TTTCGAGCACCATGGGCATATTGATGGAAAAGCGCAATATGTACATTGATGACTCCTCCGGCCTGACTCCGACAGAAGTG
CGTTCCCGTGCGCGACGTATTTTCCGCGAACATGGTGGGTTGAGCCTGATTATGATCGACTACCTGCAATTGATGCGGGT
ACCGTCACTTTCGGATAACCGTACCTTAGAAATCGCCGAAATCTCACGTTCGCTGAAAGCGTTGGCAAAAGAGTTACAAG
TGCCGGTCGTGGCACTTTCTCAGCTTAACCGTAGCTTGGAGCAACGTGCGGATAAACGACCCGTCAACTCCGACTTACGT
GAATCAGGTTCAATCGAGCAGGATGCCGACTTAATCATGTTTATTTATCGTGATGAGGTGTATCACGAAAACAGTGATGA
GAAAGGGATTGCACAGATTATTTTGGGTAAACAGCGTAACGGCCCGATCGGTTCTGTTCGACTGAAGTTTAATGGTCAAT
GGTCGCGCTTTGATAACTACGCAGGCCCGCAATACGATGATGAGTAG

Protein sequence :
MAAKKPTNNMTEPRDRQMEGLKLPPHSLEAEQSVLGGLMLDNERWDNVSERVASKDFFSRPHRRIFTEMQRLLENSKPID
LITLSESLEQKGDLESVGGFAYLAELSKNTPSAANIGAYADIVRERAVVREMISVANEIADAGYDPQGRSSEDLLDLAES
KVFQIAESRANKDEGPKSVDQILEATVARIEQLYQRPHDGVTGVSTGFTDLDKKTAGLQKSDLIIVAARPSMGKTTFAMN
LCENAAMMQEKPVLIFSLEMPGDQIMMRMLASLSHVDQTRIRTGQLDDEDWARISSTMGILMEKRNMYIDDSSGLTPTEV
RSRARRIFREHGGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLR
ESGSIEQDADLIMFIYRDEVYHENSDEKGIAQIILGKQRNGPIGSVRLKFNGQWSRFDNYAGPQYDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-102 54
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 9e-107 52
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-107 52
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-107 52
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-101 50
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 7e-92 49
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 7e-92 49
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 4e-87 47
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 6e-79 46