Gene Information

Name : fepD (YE3619)
Accession : YP_001007777.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : iron-enterobactin transporter membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 3945828 - 3946898 bp
Length : 1071 bp
Strand : +
Note : with FepBCG is involved in the transport of ferric enterobactin

DNA sequence :
ATGCCAGCGACTGATCCCCCAAACCAATTTTCAGCAAAGCGGCTCAAACCTGCCCCTGATCTCGGTAAATGCACTCCACC
TCGCCGTGGGCTTTGGCTACTAACCAGCATTGTTATATTGATGCTAGTGATGGCCGCCAGCTTGATGCTCGGCGCCAAAG
CCATCCCATTTTCAGTGGTCTGGCAAAGTTTACTGGGCGAACACAGCAATGCTGACAGCATTTTAATTCTGGAGTCCCGC
CTACCCCGCACCTTGATTGGTGTGCTCGCCGGTGCCGCCTTGGGGTTATCGGGTGCCGTCATTCAAGCACTGACCCGTAA
CCCACTAGCTGATCCGGGAATTTTGGGGGTCAATGCTGGGGCCAGTTTTGCCGTAGTGATAGGTATTACTATTTTTGGCG
TTCATGCTATTCACGGCTATATGCTTTCGGCCTTTATCGGCGCGATGATCACCACACTGGTGGTGTATTGGGTAGGAACT
CAGGGCGGCGGGCGGGTGAACCCTTTGCGTCTAACACTCTCTGGCGTGGCTATCGGGGCAGTATTACTCGGGATCTCGAC
CGGCATCTCATTGACACATCCACAGGTCTACGACCGGGTTCGCTTCTGGCAAGCAGGCTCGCTGGATATCCGTGATATGT
CGGTAGTGGCGGCAGTCGCGCCCGCTATTCTTCTCGGCAGTGTGATTGCCTTACTATTGGCACGCCCTCTCAATGCCATG
CATATGGGGGAAGATTTAGCCGCCGCAATTGGCGCACGCATTGCCCAAACCCAGTTTTGGGCCGTAGTGACAGTGACCTT
GCTATGTGGTGCTGCTACCGCCGCTGTTGGCCCAATCGCCTTTGTTGGCCTGATGGTGCCACATATTGCCCGCTGGATTG
TCGGGCCGAATCAATGCTGGATCCTTCCTTTCACCTTGGTAATGACCCCCATTTTGCTATTAGTTTCAGATATTGTGGGG
CGCTTTCTGGTTCCCGGTGAATTACGGGTTTCCATCGTGACGGCGTTCATTGGCGCTCCTTTATTGATCTGGCTGGTTCG
CCGTAATAAAAGGATGACCGCCGCACTATGA

Protein sequence :
MPATDPPNQFSAKRLKPAPDLGKCTPPRRGLWLLTSIVILMLVMAASLMLGAKAIPFSVVWQSLLGEHSNADSILILESR
LPRTLIGVLAGAALGLSGAVIQALTRNPLADPGILGVNAGASFAVVIGITIFGVHAIHGYMLSAFIGAMITTLVVYWVGT
QGGGRVNPLRLTLSGVAIGAVLLGISTGISLTHPQVYDRVRFWQAGSLDIRDMSVVAAVAPAILLGSVIALLLARPLNAM
HMGEDLAAAIGARIAQTQFWAVVTVTLLCGAATAAVGPIAFVGLMVPHIARWIVGPNQCWILPFTLVMTPILLLVSDIVG
RFLVPGELRVSIVTAFIGAPLLIWLVRRNKRMTAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 1e-42 44
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 1e-42 44
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 1e-42 44
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 1e-42 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_001007777.1 iron-enterobactin transporter membrane protein VFG0926 Protein 1e-72 57