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Name : yst1F (YE3567) Accession : YP_001007726.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 3882801 - 3884018 bp Length : 1218 bp Strand : + Note : Similar to Erwinia carotovora general secretion pathway protein F OutF SWALL:GSPF_ERWCA (SWALL:P31705) (408 aa) fasta scores: E(): 5.6e-84, 60.75 38d in 400 aa,and to Aeromonas hydrophila general secretion pathway protein F ExeF SWALL:GSPF_AERHY (SWALL:P3 DNA sequence : ATGATCCAGTACCGTTATTTGGCCGTCACAGATAAAGGCAAAAAATGCCGCGGTACACTGAGTGCCGAATCCCCCCGTGC AGCGCGGGCGCAATTGCTTGGGCAACAACTGACACCTATCAGCCTGACGCCTGAAAATGATGCGCCACGTGGGTTTTCAC TCTCCCTCGGGCGCTCTCAGGACAATATACGTGGCAACGATTTAGTGTTGCTGACGCGCCAATTGTCGACACTGGTTGCC GCCGCATTACCATTGGAAGAGGCATTACTGGCACTGGCGCAACAAAGTGAAAAGCCGCGCCATCGTGCATTACTGGAGCA AGTGCGCAATAAAATATTGGAGGGCCAGCCACTGGCTGACGCACTCGCCAGCTTCCCTAAAACATTCACCTTACTGTTTC GCACCATGGTCGCCGCCGGTGAAGCATCCGGTCATCTTGATAATGTGCTGTTGCGACTGGCAGATAATGCCGAACAGAGC CAAAAGCTAAAAAGCAAAATGCTGCAGGCAATGATCTACCCGCTGGTGCTGACGGTGGTGGCTATTGCGGTAGTTGCAAT TCTACTCACCGCAGTCGTACCTAAAGTGATCGAGCAATTTATCCATATGCAACAGGCTTTGCCACTGTCTACCCGCGCTC TTATTTCACTCAGTGATGCGTTACGCGATTTTGGCCTGTGGGCATTATTGGCGTTCCTGCTGACTGCATTGGGTGTTCGA CAATGGTTAAAACCCGCTGACAACCTGATGTGGTGGCATAAAAAAATGCTGCATCTGCCATCGATTGGCCGGGTTGTGCT GGATCTCAATCTCGCCCGTTATGCCCGCACACTTAGCATTCTCAACGCCAGTGCGGTACCGCTATTGGAAGCCATGCATA TCAGCGCGTCAGTACTGGCAAACAACTATGCACGCCAACAATTGGTTGAAGCCAGCGAAAAAGTCCGTGAGGGAAGCCGT CTGGCATCAGCACTGGAACACACTGGTCTATTATCGCCAATGATGCGCCACATGATCACTTCTGGAGAAAACAGCGGCGA GTTGGACAGCATGCTTGAACGGGCTGCCGACATTCAGGAAAACGCCTTTGTCAGCCGGATGACCATCGCGCTGGCGCTGT TTGAGCCGTTACTGGTGGTCAGCATGGCCACCGTAGTGCTGTTTATTATTCTCGCAATTTTACAACCCATCTTGCAGCTC AACAGCATGATGGGATAA Protein sequence : MIQYRYLAVTDKGKKCRGTLSAESPRAARAQLLGQQLTPISLTPENDAPRGFSLSLGRSQDNIRGNDLVLLTRQLSTLVA AALPLEEALLALAQQSEKPRHRALLEQVRNKILEGQPLADALASFPKTFTLLFRTMVAAGEASGHLDNVLLRLADNAEQS QKLKSKMLQAMIYPLVLTVVAIAVVAILLTAVVPKVIEQFIHMQQALPLSTRALISLSDALRDFGLWALLAFLLTALGVR QWLKPADNLMWWHKKMLHLPSIGRVVLDLNLARYARTLSILNASAVPLLEAMHISASVLANNYARQQLVEASEKVREGSR LASALEHTGLLSPMMRHMITSGENSGELDSMLERAADIQENAFVSRMTIALALFEPLLVVSMATVVLFIILAILQPILQL NSMMG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-61 | 51 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-60 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yst1F | YP_001007726.1 | general secretion pathway protein F | VFG2049 | Protein | 8e-64 | 51 |
| yst1F | YP_001007726.1 | general secretion pathway protein F | VFG0181 | Protein | 2e-57 | 44 |
