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Name : yst1E (YE3566) Accession : YP_001007725.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3881308 - 3882804 bp Length : 1497 bp Strand : + Note : Similar to Erwinia carotovora general secretion pathway protein E OutE SWALL:GSPE_ERWCA (SWALL:P31703) (498 aa) fasta scores: E(): 8e-102, 62.02 38d in 495 aa,and to Aeromonas hydrophila general secretion pathway protein E ExeE SWALL:GSPE_AERHY (SWALL:P31 DNA sequence : ATGAACCAGGCAGTCACACTACAGCCACAGTTGCCTTTTGCCTGGGTACAACAATATGGGGTGCTGTATCAGCAACACCC TGTGTACGGTGAACAACTGTTATTTCGACAGTCTGCCAGCCCGGAAGCTTTGCTGGAAGCCAGACGTATGCTGCCGTTGG GTCAGTTGCAATTTGTCAGTGATGAAGTATTCGAGTCCAGCATGGTTGAGCATTACCAGCAAGACTCGGACCAAGCACGC CAAATGATGGAGAATCTGGGTAACGAAATCGATTTTTGTCAATTGGCCGATGCACTGCCACAAAGTGACGACCTGCTGGA CAGCGATGACGGCGCGCCGATTATTCGCCTGATCAACGCCATATTGGGTGAAGCTATCAAAGAAGGCGCATCCGATATTC ACGTCGAACCTTTTGAGCGCCAATTAGCCATCCGTTTTCGTATTGATGGTGAATTACGTCAAATTCTCTCACCGCCACGG CAATTGGCCGCATTGCTGGTTTCTCGAATTAAGGTGATGGCTAAGTTGGATATTGCCGAAAAACGCTTGCCTCAGGATGG GCGTATTTCTCTACGTATTGCTGGTCGGGCGATTGATATTCGTGTGTCTACCCTGCCGTCCAACCACGGCGAACGCGTGG TTATGCGTTTGCTGGATAAAAACAATATGCAACTCGACCTGTCTCATTCAGGCATGGCCGCCGATAAACAGGAACTGTTC GGCCAGATCTTAAAGCAACCCCACGGGATTATTTTAGTCACTGGCCCCACGGGATCAGGCAAAAGTACCACGCTGTATGC CGCACTCCAGCAAATCAACAGCCAGTCGCTCAACATTATGACCGTCGAAGATCCTATCGAATACGATCTGGATGACATTG GCCAAACGCAGGTCAATACCAAAGTGGACATGACATTCGCCCGAGGCCTGCGCGCGATCCTGCGCCAGGATCCTGATGTG GTGATGATAGGTGAAATACGTGATACCGAAACGGCACAAATTGCAGTACAGGCTTCGCTAACAGGGCATCTGGTGCTCTC TACCCTGCACACCAATAGCGCCAGCGGTGCCGTTGGGCGTTTGCGTGATATGGGCGTGGAGCCGTTTTTACTCGGCAGTT CCCTGATTGCCGTGCTGGCACAGCGGCTGGTACGAACGCTGTGCCAGCACTGTAAAAAGCAGGAGCAAGTCAGCGCCGAC GTGCTGCAACGCTTTGGCTTTACCCCTCCAGATAACGGGATACACAACCTTTACCATCCTGGCAGCTGCGAACAGTGTAA TTTCACCGGCTATCGTGGCCGCACCGGTATACACGAACTGATGCAAGTTACGGATTCATTACGCGAAGCTATTTCTCAGG GATGCAGCGAAGTCGAATTGGAAAAAAAACTTTACCAACAAACCCGGAGCATTCGCCATGACGGATTCGAAAAAGTTCTC GCAGGGATAACCAGCCTTGAAGAAGTTTTACGTGTCACCAGAGCCAGTGAACCATGA Protein sequence : MNQAVTLQPQLPFAWVQQYGVLYQQHPVYGEQLLFRQSASPEALLEARRMLPLGQLQFVSDEVFESSMVEHYQQDSDQAR QMMENLGNEIDFCQLADALPQSDDLLDSDDGAPIIRLINAILGEAIKEGASDIHVEPFERQLAIRFRIDGELRQILSPPR QLAALLVSRIKVMAKLDIAEKRLPQDGRISLRIAGRAIDIRVSTLPSNHGERVVMRLLDKNNMQLDLSHSGMAADKQELF GQILKQPHGIILVTGPTGSGKSTTLYAALQQINSQSLNIMTVEDPIEYDLDDIGQTQVNTKVDMTFARGLRAILRQDPDV VMIGEIRDTETAQIAVQASLTGHLVLSTLHTNSASGAVGRLRDMGVEPFLLGSSLIAVLAQRLVRTLCQHCKKQEQVSAD VLQRFGFTPPDNGIHNLYHPGSCEQCNFTGYRGRTGIHELMQVTDSLREAISQGCSEVELEKKLYQQTRSIRHDGFEKVL AGITSLEEVLRVTRASEP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-125 | 63 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-125 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yst1E | YP_001007725.1 | general secretion pathway protein E | VFG2048 | Protein | 9e-125 | 63 |
| yst1E | YP_001007725.1 | general secretion pathway protein E | VFG0182 | Protein | 3e-122 | 60 |
| yst1E | YP_001007725.1 | general secretion pathway protein E | VFG1876 | Protein | 6e-112 | 56 |
| yst1E | YP_001007725.1 | general secretion pathway protein E | VFG2426 | Protein | 2e-75 | 47 |
