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Name : YE3565 (YE3565) Accession : YP_001007724.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 3879335 - 3881311 bp Length : 1977 bp Strand : + Note : Similar to Erwinia carotovora general secretion pathway protein D precursor outD SWALL:GSPD_ERWCA (SWALL:P31701) (650 aa) fasta scores: E(): 5.8e-49, 54.19 id in 644 aa, and to Yersinia pestis general secretion pathway protein D YPO0816 SWALL:Q8ZHR9 (EMBL DNA sequence : ATGATATTTAATCGCGATATAACATTTAATTATTATCAAAATTCCCGCATATTAAGTCAACGGGTTTTATCCTTTGCCGT CATTATACTATTGCTGGTAACGGCGTTACATCTGCCACGAGCCAATGCTGAAACGTTTTCTGTTAACTTCAAGAACACTG ATATTAATGAATTTATCAATACCGTCAGTAAGAATTTGAATAAAACCGCCATTATTGATCCGGCAGTAAAAGGCAACATC AGCGTACGCAGCTATCAAGAGCTGGAACCTGACCGTTATTACCCATTCTTCCTGAGTGTCCTGGAGGTTTATGGCTTTAC CGTGGTTAATATGCCCGGTGATGTGATCAAAATTATTCCTGCCAAAAATACCAAAGGTTCTGCCATCCCTTTAATTGAAG GCGAAAATCCGGCAGAAGGCGACGAAGTCGTCATGCGCGTTGTTTCGTTACATAACGTGGCAGCCAAAGAGCTGGCTCCC CTACTACGCCAGTTGAATGATGCCGCTTTCGGTACTGTCGTTCACTATGATCCTTCAAATGTCTTGCTGTTAACCGGGCG AGCGGCAGTGGTCAATCAGTTGGTCGCCATTATTAAAAACGTGGATAAGGCCGGCGACCAGACTGTAGAAACCATCAAAT TACAGTTTGCCTCGGCATCCGAGGTGGCTCGTATTGCTGAATCACTGCATAAAAGCAGCGGAAAAAATGCCAATGGCAGA ATGTCCGCCACCATTGTGGCCGACGAACGTACCAACTCAGTATTGATCGGCGGCGAAGAACAAGTTCGTCAGCGCATGAT TGATACCGTGCAAGAGTTGGATAAACAAGGTGATATCCACGGTAATACCAAAGTTATTTATCTAAAGTTTGCTAAGGCAG AAAGCCTGTTAGACGTCCTTAATGGTGTTAGTACCAACCAGCAGGGCGGTAAAGGCCAGGCTACCCCCGCCGTTGCCATG ATGAAAAACGTGGTTATTAAAGCAGATGCACAAACCAACTCCCTGATTATCAATGCCGCACCTGACTTACTGCGTGATCT TGAACAAGTGATTAATCAATTGGATATTCGCCGGGCACAAGTCTTGGTCGAGGCCATCATCGTCGAAGTTCAGGACAGTG ATGCCCTAAATCTGGGAGTGCAATGGTTTAATCGCAATGGTGGTGGCAGCAATTTCCCGGAAAACGGCGCATCCGCCAGT TCTATCACCTCTAATGACATGGGCAGTTCACTTAAAGGCATCACCGGCCTGGCCACTGGTTTTTACCGTGGCAACTGGAG CGGCCTGTTTACTGCGCTACGTACCAATAGCCAGAACGACATTTTGGCCACCCCTAGTATTGTGACTCTCGACAATATGG AAGCGGAATTCAGTGTCGGTCAGGAAGTACCGGTGTTGAGCGGTTCACAAACCACTACTGGGGATAATATTTTCCGCACG GTCGATCGTAAAAGTGTCGGTATTAAGCTGAAAGTCAAACCGCAAATCAATAAAGGTGACTCCGTGTTGCTTGAAATTGA ACAGGAAGTTTCCAGCGTGGCCGAGAAAGCACCAGGTGGAACGGGCGATCTGGGAGCGACCTTCAACACTCGTATGGTTA AAAATGCGGTGATGGTTGGCAGCAATAATATTGTGGTGGTTGGCGGTTTACTGGATAGCACCAGCCATGATGTCACCAGT AAAGTTCCCCTGCTGGGTGATATTCCGGGTATTGGTTTTCTGTTCCGTTCAACATCGCAGAAAATGGTGAAGCGTAACCT GATGCTGTTTATCCGTCCGACAATTATTCGCGAACAAGGCGACTATGTTGATGCCAGTAAGAAAAAACTCGATAAATTTC AACAAGAACAAGATATTGATCGCACCACTAACGGGCAACGAATCAATGAAAATCTGAACAAAACACTGTCGAATGGCTAC TCCCTGAGCACACTGCAAAACGATATCAGCGCCTTTTATACTCAGGAGGCACGATGA Protein sequence : MIFNRDITFNYYQNSRILSQRVLSFAVIILLLVTALHLPRANAETFSVNFKNTDINEFINTVSKNLNKTAIIDPAVKGNI SVRSYQELEPDRYYPFFLSVLEVYGFTVVNMPGDVIKIIPAKNTKGSAIPLIEGENPAEGDEVVMRVVSLHNVAAKELAP LLRQLNDAAFGTVVHYDPSNVLLLTGRAAVVNQLVAIIKNVDKAGDQTVETIKLQFASASEVARIAESLHKSSGKNANGR MSATIVADERTNSVLIGGEEQVRQRMIDTVQELDKQGDIHGNTKVIYLKFAKAESLLDVLNGVSTNQQGGKGQATPAVAM MKNVVIKADAQTNSLIINAAPDLLRDLEQVINQLDIRRAQVLVEAIIVEVQDSDALNLGVQWFNRNGGGSNFPENGASAS SITSNDMGSSLKGITGLATGFYRGNWSGLFTALRTNSQNDILATPSIVTLDNMEAEFSVGQEVPVLSGSQTTTGDNIFRT VDRKSVGIKLKVKPQINKGDSVLLEIEQEVSSVAEKAPGGTGDLGATFNTRMVKNAVMVGSNNIVVVGGLLDSTSHDVTS KVPLLGDIPGIGFLFRSTSQKMVKRNLMLFIRPTIIREQGDYVDASKKKLDKFQQEQDIDRTTNGQRINENLNKTLSNGY SLSTLQNDISAFYTQEAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-113 | 44 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 3e-122 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YE3565 | YP_001007724.1 | general secretion pathway protein D | VFG2047 | Protein | 2e-110 | 44 |
