Gene Information

Name : ysaH (YE3557)
Accession : YP_001007715.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : type III secretion system effector protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 3872301 - 3872777 bp
Length : 477 bp
Strand : +
Note : Previously sequenced as:Yersinia enterocolitica hypothetical protein YsaH SWALL:Q9KKJ1 (EMBL:AF005744) (158 aa) fasta scores: E(): 1.6e-61, 99.36 38d in 158 aa. Also highly similar to Salmonella typhimurium type III secreted invasion protein IagB or STM28

DNA sequence : 
ATGAAAACTATTATTTATTATTTATCCATTATACTGTTTCTCAGCCCGGTGATAGCTCAGGCATCTTGTTTATCAAGTGC
GGCTATTCGCTGGGATGTGCCAGAAATTATTCTCGAAGCGATTATTATTAATGAATCGGGCGGAAAGCCGGATGCGCGTA
ATATTAACAAAAACGGTAGCCATGATTATGGCCTGATGCAGATTAATACCATTAATATTGATCCGCTAAAATCCCAAGGG
ATCATCAAGAATAAACAGGCGCTGATGCAGCCTTGCACCAACATTGAAGCTGGGGCCTATTTGCTGAGCCAGAAGTTTAA
AAAACATGGCTATAGCTGGCGCGCAGTGGGTGCGTATCATTCAGAAACTGCCCACTATAGAGACAAGTACGCCAGCAAAA
TTATGAAAATCGTCAATTCCGGGCCTGATTTTGCCCAAAGGAACGCGTCGCTGTTAAGATCCACTCCCACATATTAA

Protein sequence : 
MKTIIYYLSIILFLSPVIAQASCLSSAAIRWDVPEIILEAIIINESGGKPDARNINKNGSHDYGLMQINTINIDPLKSQG
IIKNKQALMQPCTNIEAGAYLLSQKFKKHGYSWRAVGAYHSETAHYRDKYASKIMKIVNSGPDFAQRNASLLRSTPTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 3e-13 43
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 2e-13 43
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 4e-13 42
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 4e-13 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ysaH YP_001007715.1 type III secretion system effector protein VFG1789 Protein 7e-63 99
ysaH YP_001007715.1 type III secretion system effector protein VFG0539 Protein 7e-14 43