|
Name : ysaJ (YE3553) Accession : YP_001007711.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Virulence Product : type III secretion system apparatus lipoprotein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 3869882 - 3870625 bp Length : 744 bp Strand : + Note : Previously sequenced as Yersinia enterocolitica type III secretion apparatus lipoprotein YsaJ SWALL:Q9KKI3 (EMBL:AF005744) (247 aa) fasta scores: E(): 1.4e-89, 100 id in 247 aa, and to Escherichia coli O157:H7 putative lipoprotein of type III secretion ap DNA sequence : ATGAATAAACTGACGAAATTTTTGGTGATAAGTGCTATTTGGCTGCTGTCTGGTTGTGATAACCAAGTACTGCTCACTGA ACTTAGCCAACGCCAGAGCAATGAAGTGCTGGCGGTCCTACAGGAAAATGGCGTGGAAGGAACGCGCAGGGAAAATGGCA AGCTGGGTAATTCCATTAAGGTGGCACGCAGTGATTTTGTGACCGCAGTGGATTTGTTACGCCTGTACAACCTGCCCTCT AAAGAGTCAGTGGAAATTATCCAGGCATTCCCAGGGGATTCACTGGTGGCATCACCACAGGCAGAACGTTCACGCTTGCT TTCCTTAATTGAGCAACGGTTAGAACAATCGCTGCTGACCATTCCCGGCGTGGTAAACGCCAGAGTGCACGTCAGTTATC CCTTAAACAGCAATAGCCGGGTCAAAGAACCGCAGCAGGTTTCAAGTCTGGTGACTTATGCTGGCAATGAAGATCCTAAG CTGATGATGAGCAAAATTAAGTTATTTCTCACCAACAGCTTTGCTGAAGCCAGTTTTGACAATGTATCCGTGGTAGTGGT TGAGCGCCCGCCATTGCAGCGACAGGTCAAAAGTGAGCCACAGTTCCCGGTAGCACCGGTGCTATTGATCGGTATTGCTG CGGCTCTGATGACCGCTGCCGGTGCCATTTTGTTACTTTGGCGTCGCAAGCAACAAAACAGCAAAAAAGAAGCCCCTTCG GACAGTACGGAGCAAAAATTATGA Protein sequence : MNKLTKFLVISAIWLLSGCDNQVLLTELSQRQSNEVLAVLQENGVEGTRRENGKLGNSIKVARSDFVTAVDLLRLYNLPS KESVEIIQAFPGDSLVASPQAERSRLLSLIEQRLEQSLLTIPGVVNARVHVSYPLNSNSRVKEPQQVSSLVTYAGNEDPK LMMSKIKLFLTNSFAEASFDNVSVVVVERPPLQRQVKSEPQFPVAPVLLIGIAAALMTAAGAILLLWRRKQQNSKKEAPS DSTEQKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ysaJ | AAS66833.1 | YsaJ | Not tested | SSR-1 | Protein | 2e-41 | 52 |
| prgK | AAS66872.1 | PrgK | Virulence | SSR-2 | Protein | 3e-40 | 49 |
| prgK | YP_217790.1 | cell invasion protein | Virulence | SPI-1 | Protein | 6e-38 | 48 |
| prgK | NP_461792.1 | needle complex inner membrane lipoprotein | Virulence | SPI-1 | Protein | 6e-38 | 48 |
| prgK | NP_457265.1 | pathogenicity 1 island effector protein | Virulence | SPI-1 | Protein | 5e-38 | 48 |
| prgK | NP_806474.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 5e-38 | 48 |
| ECs3716 | NP_311743.1 | EprK | Not tested | LIM | Protein | 2e-38 | 43 |
| eprK | AAZ31284.1 | EprK | Virulence | ETT2 | Protein | 1e-36 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ysaJ | YP_001007711.1 | type III secretion system apparatus lipoprotein | VFG1787 | Protein | 2e-98 | 99 |
| ysaJ | YP_001007711.1 | type III secretion system apparatus lipoprotein | VFG0533 | Protein | 3e-38 | 48 |
