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Name : ysaC (YE3548) Accession : YP_001007706.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Virulence Product : type III secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 3865308 - 3866999 bp Length : 1692 bp Strand : - Note : Previously sequenced as: Yersinia enterocolitica type III secreted effector protein, YsaC SWALL:Q9KKH8 (EMBL:AF005744) (525 aa) fasta scores: E(): 8.3e-190,97.9 38d in 524 aa. Note the differing sequence at the very C-terminus. Also similar to Salmonella DNA sequence : ATGAAAGTTAAATACAGAGGAGTGATCTATTTTTCACTCTTATTGTTGGCAGGCCATATGAGTCAGGTCAACGCTGAGGT GATTACCGCATTGCCCGTCGGGCAGGAAAACGTTAATGACTCCTTTGTCGCAAATAACGTCATGGTCGGCAAGCTGTTTG ATGCCGTCGCTGAACGGCTGGAGAAGCCGATTATTCTCAGTAAGTTGGCGGCACAAAAGCGCGTCACTGGGAACTTTAAT TTGGCGAATGCTGATGAGATGTTTAAAGCATTATCCCGACGTATGGCGCTGGTGTGGTACGACGATGGCGCGGGCATCTA TGTTTATGACAACAGCGAAATGCGTAGTGTCATTGTTCACACTCAGGCTGCGGGTAGTGGGCAAGTGCTTAACTATATTC AGAAAACCGGAATTTACGATAAGCGTTTTCCGGTCCGTACCGAAGGCGATAACCGTTTACTGTTTGTCTCAGGACCACCG CTTTATGTGGAGTTGATTAGTGCGGCAGCCGCCTATCTTGATGAGCGTATTAAGCAGGAAGACTTGGCCAGCGGCGGTGA AGTGGCAGTTATCCCGTTAAAACACTCATCAGTCACCGATCGTACCTATAACCAACGTGGGCAAAGCATCACAATTCCTG GGATGTTAACGGCACTTAATGCTCTGTTCCAGGGTAACAATGGCACGATGGAAAGCACACTGACGATACAACCGAAAGAG GGTGAACCGACGATCGAAGCAGGTTTTCCGGCTCCACCATCAGTTAACGGCGGTGACAGCGCGCTTAAGCTGGCTGCTGG CGCTAAAACGAGCAGCCCATTTTCTCTGGTCGCGTATCCCGACAGCAACAGTCTGGTAGTAAAAGGCAGCGCAGAACAGA TTCGCTATGTTCGCCAGTTAGTCCATACCTTGGATAACAGCCGTAGCCAAGTGGAGCTATCACTGTGGATTATCGATGTG ACGCAAAGCAAAGTGGACGATCTGGGCGTGCGTTGGGAAGCGGGTGGTATCGGTGTTGCTGGCGGTTCAGTCACCTTTAA CCGCAGTACGCTAAGTGATAGCAAAACGTTTTTGGCGCAAATCGACGCGATTAGTAAAACCGGCAATGCCCGTATCGTTT CGCGCCCGGTTATCTTGACGCAGGAGAATGTGCCGGCGCTATTTGATAACAACACCAGTTTTTATGCCCGAGTGGAGGGC GAGCGGGTGGCCTCACTGCAACAGGTGACTTATGGCACCATGATCAGTGTGTTACCGCGCCTCTCAGGGGGATCGAGTGT TGAAATGGAAGTCAATATTGAAGATGGCGGATTAAACCGTGACAACTCGGGCAAACTTGCCGATATCGCTGGGCTGCCAG AGGTTAACCGCACCAACATCAATACTGTGGCACGTATTGGTCGCGATAAAAGCCTGCTGATTGGCGGATATACCCGTGAT CAAGTTGAAGAGGGTGAGACTCGGATTCCGCTGTTAAGTGATATTCCGCTTTTGGGTAACCTGTTTAAGTACCGTTCGCA CAACCAGCAGAAAATGATCCGTATCTTTTTGATTCAACCGCGTTTACTGGATGAAAACGAAGCATGGGATGGTCGTCAGT TCTCTGAAACTGAACGCTTAACCCGACATGATGGCAAGTTAAACGGCACTGTTGAGTTTCTGAAGAAGTATGCGAGCCAG CCGTGGCAATAG Protein sequence : MKVKYRGVIYFSLLLLAGHMSQVNAEVITALPVGQENVNDSFVANNVMVGKLFDAVAERLEKPIILSKLAAQKRVTGNFN LANADEMFKALSRRMALVWYDDGAGIYVYDNSEMRSVIVHTQAAGSGQVLNYIQKTGIYDKRFPVRTEGDNRLLFVSGPP LYVELISAAAAYLDERIKQEDLASGGEVAVIPLKHSSVTDRTYNQRGQSITIPGMLTALNALFQGNNGTMESTLTIQPKE GEPTIEAGFPAPPSVNGGDSALKLAAGAKTSSPFSLVAYPDSNSLVVKGSAEQIRYVRQLVHTLDNSRSQVELSLWIIDV TQSKVDDLGVRWEAGGIGVAGGSVTFNRSTLSDSKTFLAQIDAISKTGNARIVSRPVILTQENVPALFDNNTSFYARVEG ERVASLQQVTYGTMISVLPRLSGGSSVEMEVNIEDGGLNRDNSGKLADIAGLPEVNRTNINTVARIGRDKSLLIGGYTRD QVEEGETRIPLLSDIPLLGNLFKYRSHNQQKMIRIFLIQPRLLDENEAWDGRQFSETERLTRHDGKLNGTVEFLKKYASQ PWQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ysaC | AAS66838.1 | YsaC | Not tested | SSR-1 | Protein | 4e-94 | 43 |
| invG | AAS66859.1 | InvG | Not tested | SSR-2 | Protein | 7e-99 | 41 |
| invG | NP_461819.1 | outer membrane secretin precursor | Virulence | SPI-1 | Protein | 2e-99 | 41 |
| invG | YP_217817.1 | invasion protein; outer membrane | Virulence | SPI-1 | Protein | 2e-99 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ysaC | YP_001007706.1 | type III secretion system protein | VFG1782 | Protein | 0.0 | 98 |
| ysaC | YP_001007706.1 | type III secretion system protein | VFG0559 | Protein | 1e-99 | 41 |
