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Name : ysaS (YE3541) Accession : YP_001007697.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Virulence Product : type III secretion apparatus protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4794 EC number : - Position : 3857030 - 3857299 bp Length : 270 bp Strand : - Note : Similar to Yersinia enterocolitica type III secretion apparatus protein YsaS SWALL:Q93NK6 (EMBL:AF369954) (89 aa) fasta scores: E(): 2.3e-29, 100 id in 89 aa, and to Salmonella typhimurium, Salmonella typhi, Salmonella dublin, Salmonella enteritidis,Salmo DNA sequence : ATGGAAAATATTATTTACGCCAGTAATAAAGCCATGCTGCTTATTGTGCTGCTATCGGCCATTCCGGTGATGGTGGCGAC GGTGGTAGGTCTGTTGATTGGCTTGATTCAAACTGTGACCCAACTTCAGGAACAGACACTGCCTTTTGGTATCAAGTTAC TCGCGGTATTTGGCTCACTGTTTATGATCTCTGGTTGGCTGTCTGACAAGGTAATGAACTACGCCACTGAAGTGCTGGCT ATCGCATTATCGCCCGCAGGAGTGGGGTGA Protein sequence : MENIIYASNKAMLLIVLLSAIPVMVATVVGLLIGLIQTVTQLQEQTLPFGIKLLAVFGSLFMISGWLSDKVMNYATEVLA IALSPAGVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaQ | YP_217808.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 7e-19 | 53 |
| spaQ | NP_457283.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 7e-19 | 53 |
| spaQ | NP_806492.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 7e-19 | 53 |
| spaQ | AAS66866.1 | SpaQ | Not tested | SSR-2 | Protein | 1e-18 | 53 |
| spaQ | NP_461810.1 | needle complex export protein | Virulence | SPI-1 | Protein | 7e-19 | 53 |
| epaQ | AAZ31292.1 | EpaQ | Virulence | ETT2 | Protein | 6e-19 | 53 |
| ECs3724 | NP_311751.1 | EpaQ | Not tested | LIM | Protein | 6e-19 | 53 |
| ysaS | AAS66847.1 | YsaS | Not tested | SSR-1 | Protein | 3e-17 | 52 |
| hrcS | AAT96263.1 | HrcS | Virulence | S-PAI | Protein | 3e-09 | 50 |
| hrcS | AAT96304.1 | HrcS | Virulence | S-PAI | Protein | 3e-09 | 50 |
| hrcS | AAT96344.1 | HrcS | Virulence | S-PAI | Protein | 3e-09 | 50 |
| hrcS | ABA47280.1 | HrcS | Virulence | S-PAI | Protein | 4e-09 | 48 |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 6e-11 | 47 |
| escS | AFO66401.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-09 | 43 |
| escS | AFO66341.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-09 | 43 |
| hrcS | AAT96147.1 | HrcS | Virulence | T-PAI | Protein | 7e-08 | 43 |
| hrcS | NP_791221.1 | type III secretion protein HrcS | Virulence | Hrp PAI | Protein | 5e-08 | 43 |
| hrcS | AAT96201.1 | HrcS | Virulence | T-PAI | Protein | 7e-08 | 43 |
| hrcS | AAG33885.1 | HrcS | Virulence | Hrp PAI | Protein | 4e-08 | 43 |
| hrcS | ABQ88360.1 | HrcS | Virulence | Hrp PAI | Protein | 1e-05 | 43 |
| hrpO | AAB05076.1 | HrpO | Virulence | Hrp PAI | Protein | 1e-05 | 43 |
| lscS | AAO18039.1 | LscS | Virulence | TTSS locus | Protein | 5e-10 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ysaS | YP_001007697.1 | type III secretion apparatus protein | VFG1772 | Protein | 3e-35 | 100 |
| ysaS | YP_001007697.1 | type III secretion apparatus protein | VFG2454 | Protein | 1e-19 | 65 |
| ysaS | YP_001007697.1 | type III secretion apparatus protein | VFG1013 | Protein | 3e-15 | 55 |
| ysaS | YP_001007697.1 | type III secretion apparatus protein | VFG0550 | Protein | 2e-19 | 53 |
| ysaS | YP_001007697.1 | type III secretion apparatus protein | VFG0395 | Protein | 3e-12 | 47 |
| ysaS | YP_001007697.1 | type III secretion apparatus protein | VFG0187 | Protein | 2e-05 | 44 |
| ysaS | YP_001007697.1 | type III secretion apparatus protein | VFG2132 | Protein | 2e-13 | 42 |
| ysaS | YP_001007697.1 | type III secretion apparatus protein | VFG0043 | Protein | 1e-10 | 41 |
