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Name : sycA (YE3538) Accession : YP_001007694.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Virulence Product : putative type III secretion apparatus protein Function : - COG functional category : - COG ID : - EC number : - Position : 3854483 - 3854992 bp Length : 510 bp Strand : - Note : Previously sequenced as Yersinia enterocolitica type III secretion apparatus protein SycA or SycB SWALL:Q932S4 (EMBL:AF005744) (169 aa) fasta scores: E(): 1.2e-67, 97.63 38d in 169 aa. Also similar to Salmonella typhimurium, Salmonella typhi, and Salmonel DNA sequence : ATGAACCAGAAACATGATGCGGCAGAAAATCAAACGGAAGATATGGATGTTGTTTTTGATGAACTTTGTCAGGCATTAAT GGAGGGGGCCAGTTATAAAGATATTTATGGTATCCCACAAAGTACCATGGACGGACTTTATGCTTACGCTTATGAATTTT ATGAACAAGGTAAATTAAAAGAAGCCGAAACGTTCTTTCGCTTTCTAAGTATTTATGATTTTTATAATACTGATTATGTT ATGGGGTTGGCAGCTGTTTATCAGCTAACCAAGCGTTATGAAAAAGCAGTGGAACTTTACTCTTTGGCTTTTGTTCTGGC AAAAGATGATTACCGTCCATTATTCCATGCTGGGCAGTGTAATTTAATGCTGAAAAAAAGTAGTGCTGCGTTGCATTGTT TTGAAAGTACCTTTAATGGGAGTGATGATTTGGAGTTGAAACAAAAATCCTCCGTTTATTTAACTGCATTAAAGAAAAAT CTAACAGAAAGTGAACCAGCAGAAGGATAA Protein sequence : MNQKHDAAENQTEDMDVVFDELCQALMEGASYKDIYGIPQSTMDGLYAYAYEFYEQGKLKEAETFFRFLSIYDFYNTDYV MGLAAVYQLTKRYEKAVELYSLAFVLAKDDYRPLFHAGQCNLMLKKSSAALHCFESTFNGSDDLELKQKSSVYLTALKKN LTESEPAEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sycB | AAS66850.1 | SycB | Not tested | SSR-1 | Protein | 4e-32 | 57 |
| sicA | YP_217805.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 2e-39 | 52 |
| spaT | NP_457280.1 | unknown function | Virulence | SPI-1 | Protein | 2e-39 | 52 |
| spaT | NP_806489.1 | hypothetical protein | Virulence | SPI-1 | Protein | 2e-39 | 52 |
| sicA | NP_461807.1 | secretion chaperone | Virulence | SPI-1 | Protein | 2e-39 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sycA | YP_001007694.1 | putative type III secretion apparatus protein | VFG1769 | Protein | 2e-73 | 98 |
| sycA | YP_001007694.1 | putative type III secretion apparatus protein | VFG0547 | Protein | 6e-40 | 52 |
| sycA | YP_001007694.1 | putative type III secretion apparatus protein | VFG0988 | Protein | 6e-36 | 48 |
| sycA | YP_001007694.1 | putative type III secretion apparatus protein | VFG2451 | Protein | 2e-38 | 46 |
