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Name : dnaB2 (YE3514) Accession : YP_001007676.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Unknown Product : putative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 3825720 - 3827087 bp Length : 1368 bp Strand : - Note : Similar to Escherichia coli replicative DNA helicase DnaB or GroP or GrpA or b4052 SWALL:DNAB_ECOLI (SWALL:P03005) (471 aa) fasta scores: E(): 2.7e-83, 53.44 id in 436 aa, Salmonella typhi DNA helicase Sty4522 SWALL:Q8Z1M2 (EMBL:AL627282) (454 aa) fasta s DNA sequence : ATGGCTGAATCAAAGATCGATCCTCTTCGTGGGCTGGTTTCTATTGATGCGGAACAGGCTGTGTTGGGGGGATTGATGCT GGATAATGATCGTTGGGATGATATCGCCCTTATTCTCAAGGCGGAAGATTTCTTCGGTAAGATTCATCAAATCTATTTTC GTGAAATGCAGCGACTTATCGATGCTGGAAAACCCATTGATTTACTGACGCTAACGAATGCTTTTGAGCATCAGGGGCAA CTCGAACTTGTTGGCGGCTTCGCCTATGCCGCCGAACTCAGTAAAAATACCCCCAGCGCCGCCAATATTGTCGCTTACAG TGAAATTGTGGCTCGATTCAGCCGGGCACGTCAGCTTGCTAGTTTAGGCTATGACATCACACATGAAATAACCGCACCGC GTGCGAATATTGCTGCAATCATGGAAAAAGCCGAAAAGCGGATCATCGCCATTGCCGAGCAATCCGAACCTGAAAAAGCA GTGTCGCTAATTGACGGCATGGAAAGCATGCTTACGCAGCTTGAACTTCGGTCTAAGTCGGGTGACGGCATAACCGGTAC CCCAACAGGGTTTATCGAGCTGGATACCCGTACCTGTGGTTTTCAGGACAGCGATTTGATCTTGCTGGCAGGCCGCCCCT CAATGGGAAAAACAGCGTTGGCTATGTCGATGGTTACTGGCGCACTTCAGAGGCGTGAGAACAGCGTAGTACAGGTGTAT AGCCTTGAGCAGCCAACCGAGCAGTTATTGATGCGCATGGTTTCTTCTCTGGGCAATATTGAGCTTCAACGTCTTAAAAG TGGTTTGCTGGATGATGAAGACTGGGCGCGTATTAGTCATGCGGCCAACATTATGGTCGGAGAATGGCGAGATCGGCTGG TCATTGATGATAGCTGTGACCTAACCCCCGCTATGCTGCGGATCCGCGCTCGGCGTAATGCACGTAAAAATGGTAAACCC GCACTGATCATGCTGGATTACTTGCAGTTGATGCGTTGCCCTGGGCAAGAGAACCGTACCCAGGAAATTGCTGAGATATC ACGCGCGCTCAAAGCACTGGCGAAGGAAATGAAATGCCCGGTACTGGCGCTCTCTCAACTTAACCGATCCTTAGAACAAA GGGTGGATAAACGACCGAATAACGGTGATCTTCGAGACTCTGGTGCATTGGAGCAGGATGCCGATGTCATCATGTTTGTT TATCGCGATGAGGTCTATGATACGAACACAGAAAACAAAGGGATCGCTGAGATCATTATCGGCAAGCAGCGGCAGGGTCC GATAGGTACGGTCAGAGTCAAGTTTGACAGCCGTTACACCCGTTTCGACGATATTAAGACTCAAACGGATCTTGAGGGCG CTTACTGA Protein sequence : MAESKIDPLRGLVSIDAEQAVLGGLMLDNDRWDDIALILKAEDFFGKIHQIYFREMQRLIDAGKPIDLLTLTNAFEHQGQ LELVGGFAYAAELSKNTPSAANIVAYSEIVARFSRARQLASLGYDITHEITAPRANIAAIMEKAEKRIIAIAEQSEPEKA VSLIDGMESMLTQLELRSKSGDGITGTPTGFIELDTRTCGFQDSDLILLAGRPSMGKTALAMSMVTGALQRRENSVVQVY SLEQPTEQLLMRMVSSLGNIELQRLKSGLLDDEDWARISHAANIMVGEWRDRLVIDDSCDLTPAMLRIRARRNARKNGKP ALIMLDYLQLMRCPGQENRTQEIAEISRALKALAKEMKCPVLALSQLNRSLEQRVDKRPNNGDLRDSGALEQDADVIMFV YRDEVYDTNTENKGIAEIIIGKQRQGPIGTVRVKFDSRYTRFDDIKTQTDLEGAY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 0.0 | 100 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 0.0 | 87 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 0.0 | 86 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 5e-113 | 58 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-118 | 55 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-118 | 55 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-103 | 51 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-95 | 48 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 4e-91 | 47 |
