Gene Information

Name : YE3505 (YE3505)
Accession : YP_001007667.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : putative type IV pilus operon exported poprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3817733 - 3818170 bp
Length : 438 bp
Strand : -
Note : Similar to Escherichia coli, and Salmonella typhimurium PilM protein SWALL:O07371 (EMBL:AB021078) (145 aa) fasta scores: E(): 6e-14, 33.56 38d in 146 aa and to Salmonella dublin PilM SWALL:Q9KHW6 (EMBL:AF247502) (139 aa) fasta scores: E(): 5.5e-12, 37.6 3

DNA sequence : 
GTGGGTTATGCCATAGCAGTGATGGCGATGGTTTTTGTGCTGATGGTTGGCAATGTTCAATGGCGTGAATCTGCTGGCTA
TCAGGCGCAGGCCATGAATCGTACCGCAGACTCTCTGGCCGCTGACATGCTGCGGTTGGCCAGTGGCGTCAATGATTGGC
GCTACTACCGTACTCCAGATGAAGGCAACTTGAATACTCGTCAGTTTGGCCTCGTCCCGCTCTCCGATAACCGTATCAAC
GCTGCCATACGACATGGACGTTTGTGGTTGTGGTTACCTGAACAGCAAGGGTTGGTCGCCAGCCTTAATCGGCAATCAGC
AAACTCCACACTGGTAGGGATTATTGCTGGTGGCCGGCTGCGAATGGCTGATGGTACTGACATGAATCTCTCCCTTCCCG
CCGGAATGGCCGAAGGGAATATTGTTTATCTTAATTGA

Protein sequence : 
MGYAIAVMAMVFVLMVGNVQWRESAGYQAQAMNRTADSLAADMLRLASGVNDWRYYRTPDEGNLNTRQFGLVPLSDNRIN
AAIRHGRLWLWLPEQQGLVASLNRQSANSTLVGIIAGGRLRMADGTDMNLSLPAGMAEGNIVYLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3505 YP_001007667.1 putative type IV pilus operon exported poprotein Virulence YAPI Protein 1e-61 100
YpsIP31758_3735 YP_001402689.1 PilM protein Not tested YAPI Protein 1e-51 80
pilM CAF28486.1 putative exported protein Virulence YAPI Protein 1e-51 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE3505 YP_001007667.1 putative type IV pilus operon exported poprotein VFG2309 Protein 4e-62 100