Gene Information

Name : YE3502 (YE3502)
Accession : YP_001007663.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : putative type IV pilus protein
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 3812695 - 3814248 bp
Length : 1554 bp
Strand : -
Note : Similar to Salmonella dublin nucleotide-binding type IV pili protein PilQ SWALL:Q9KHW5 (EMBL:AF247502) (571 aa) fasta scores: E(): 3.8e-99, 55.35 38d in 495 aa,Salmonella typhi PilQ or Sty4545 SWALL:Q9LBE1 (EMBL:AF000001) (571 aa) fasta scores: E(): 1.5e-

DNA sequence : 
ATGACTATTGATAAGGAAATCATCGAGTTTGTCTTTGTTGAGTATCTGCCTTGTGGGCAAGTAGTGCTGGTTATTGATAA
CAATCGACGCACCGATCCACGGGTACAGCGCTGGGTGATGGAAATGGCGCGTATTCACACTGGTGCTAAAAATGAATTTG
TCGCTCTTAGTGAGCTGAATAACCGCCGCACCCGCATAACGGATGGTTCGCAATATAGCATTTGCCTGAAAGACCTGACC
AACATCAGTGAACGGCAGAAAAAAGTGCTGCGGTATTTTGAATTGTCACGCCAGCTCAGGGCTTCCGATATCCATCTCAT
CATCGACAGAAAATTGACTCGGGTAGAAATGCGTTTGTATGGTGATTTGGAAGAGGTGGATTCACTGCCGAGGTGGGAGG
GGATGGCGCTGGCATCAACCATCATTCTCTCAATGTGTGATGTAGCTGAGACGCAGTTTTATCCTGGGCGAGAACAGGGT
GGGCGCGTAAAATCCGATTTTGCTCGTAAAGTTGGTGTTTTCGGTGCGCGTTATGAGCATCGTCCAACCGCCGACGGCCT
TTATGTGGTGATGCGCATTATCGATGATGACGGTGATGCGGTGCCGACCTTGAATACATTAGGATTTATGCCAGAACAGC
GTGCACAGGCAGAGAAAATTCTACGAATTCCTGAGGGAATGGTGATCCTCTCCGGCCCCACTGGATCAGGGAAAAGTACC
ACTTTACGCAGTTTCAGCCGAATGTATCTGGATCGCACCGAGGGGCGGCGTCGTTTGCTGACCATTGAAGATCCACCGGA
AGGGGGGATAAAAGGCGCAATACAGACTCCCATCATTGCCGATAAAAGCCGTACCGATGTGGTTCAGCAAGCCTGGGATA
GCGCCAATGCGTCTGCTTTACGTCTTGATCCGGATGCCATTCTTAACGGAGAAATGCGAGATCTGATATCTATTGTCGCA
GCTGTTTATGCTGCTCAGACCGGCCATTTGCTGTTGACGACACTGCACGCCAACAGTGCCGTCGGCATACTCAAACGCAT
GGCTGTTTTGGGTGTTTCGGAGGCGCTGATTGCAGACGCCCAGCTTATCGTGGGGCTTATCAGCCAGCGCCTGGTACAGA
TGCTGTGTCCGCATTGTCGCATTCCCTGGGAAACCAAGGCTCCGCGATTGACGCCAGAAATCCGTATACGCCTCGAACGT
TATTGTTGTGTAAAAGGGATTTGTCATCCGCAACAACTCTGGTTTCGGAGTGAAGAAGGATGCGCACATTGCCAGCAACG
ACTGGCGATTAGTGATCGTATTGTCAGTCGTGGTGTGATCGGGCGCAGTGTGGTAGCGGAAGTGATCCGCCCCGATGCGC
GATTTATGTCGCTGTATCTGACCCATGGGCCAGCAGTGGCCAGACAATACTGGGTTAACTCACTGGCAGGCATAACACGC
GTGACTCATCTGCTGCACAAATTAGCAGCGGGGCTGGTTGATCCTCTTGATGCCGATCTGGTTTGTTCGCTGGACGAAGA
TCACATCCTGACCTGTGAGGTACCTGATGTCTGA

Protein sequence : 
MTIDKEIIEFVFVEYLPCGQVVLVIDNNRRTDPRVQRWVMEMARIHTGAKNEFVALSELNNRRTRITDGSQYSICLKDLT
NISERQKKVLRYFELSRQLRASDIHLIIDRKLTRVEMRLYGDLEEVDSLPRWEGMALASTIILSMCDVAETQFYPGREQG
GRVKSDFARKVGVFGARYEHRPTADGLYVVMRIIDDDGDAVPTLNTLGFMPEQRAQAEKILRIPEGMVILSGPTGSGKST
TLRSFSRMYLDRTEGRRRLLTIEDPPEGGIKGAIQTPIIADKSRTDVVQQAWDSANASALRLDPDAILNGEMRDLISIVA
AVYAAQTGHLLLTTLHANSAVGILKRMAVLGVSEALIADAQLIVGLISQRLVQMLCPHCRIPWETKAPRLTPEIRIRLER
YCCVKGICHPQQLWFRSEEGCAHCQQRLAISDRIVSRGVIGRSVVAEVIRPDARFMSLYLTHGPAVARQYWVNSLAGITR
VTHLLHKLAAGLVDPLDADLVCSLDEDHILTCEVPDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3502 YP_001007663.1 putative type IV pilus protein Virulence YAPI Protein 0.0 100
YpsIP31758_3731 YP_001402685.1 type IV secretion system protein Virulence YAPI Protein 0.0 91
pilQ CAF28490.1 putative ATP binding protein Virulence YAPI Protein 0.0 91
pilQ NP_807844.1 nucleotide-binding protein Virulence SPI-7 Protein 6e-132 55
pilQ AAF14817.2 PilQ Virulence SPI-7 Protein 5e-132 55
pilQ NP_458633.1 nucleotide-binding protein Virulence SPI-7 Protein 6e-132 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE3502 YP_001007663.1 putative type IV pilus protein VFG2313 Protein 0.0 100