Gene Information

Name : YE3501 (YE3501)
Accession : YP_001007662.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : type IV pilus integral membrane protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1459
EC number : -
Position : 3811593 - 3812702 bp
Length : 1110 bp
Strand : -
Note : Similar to Escherichia coli, and Salmonella typhimurium integral membrane protein PilR SWALL:O07376 (EMBL:AB021078) (365 aa) fasta scores: E(): 3.8e-71,50.82 38d in 364 aa, and to Escherichia coli PilR SWALL:Q93D63 (EMBL:AF399919) (365 aa) fasta scores: E

DNA sequence : 
ATGTCTGAGAGGCGTTTTCGGCCTGTCCGCAACATGTCGTTGGGACAGCGCCTGCGCTATGAACTGGTACGCCATACGTT
TAGCACTCGTTATCGTCTGCAATTCTATGATGCGCTGCGTTTTTTATTGGAAAATGGCAACCCCTTAGGCGTTGCGCTAC
AGATGATTGCCGAGGTTCATACCGATTTTGGCAAACACTGGCATCCCTATGGCGATTTGGTGGATGACTGTCTGGAGTCA
CTATCGGATAACGGTGCTGGGCGCACATTTGAGAACGTACTGGCCGCTTGGGGGCCATTGGAAGAGGCTGCGCTAATCAG
CGCTGGGATGCGCAGTGGAAAGTTGCCGGAAGCACTGCTGCAAGCGGGCAAGCTGGTCGAAGCTCGTCGCCGTATTCTGA
TGTTGGTCAGCAAAATGTCCCTTTATCCACTGCTGCTGTTTTGCTTGGGCGGCGGCATGTTGGTCATTAACGGCGCGTAC
CTGATTCCCACACTGCGTAAACTTTCTGATCCACAAGATTGGAGCGGCGCGTTAGGTTTTATGCATGCACTGGCCAACTT
TACCGACAGACAGGGTACCGCTGCGGTGGGTGCGGTTGCCATCTTAATTGGTCTGGTGCTGTGGTCTATCCCCCGTTGGC
GTGGCCGGTTACGTCGCTTAGCCGATAACATGGTGCCCTGGTCGGTCTACCAAGATATTCAGGGTGCGGTGTTCTTGATG
AATATGGCTGCTCTTCTGAGAGCGAATGTGCAGACGTTAGAGGCGCTGTACATCTTACAGCCGTTTTCTTCTCCCTGGTT
GCAAGAGCGCCTAGACGCCATTATTGCCGGTGTTGAACAAGGTGATCATCTAGGTAAGGCGCTACGTAACAGTGGTTATC
AATTTCCCAGTAAAGAAGCGGCTAATTATCTTTCCTTGCTAACCGAGGGGGATGGCGCGCCAGATATTATTGGCCGCTAC
GGTGACCGCTGGCTGGAGCAAACACTTGAACGGGTAAATAAGCGCGTCATGGTAGTGATGCTTTTCTCTCTGCTGCTGAT
TTTCAGTTTCTTCTTACTCATCTTGTCAACGGTGATGCAAATTCAGGATATGACCAGTGACTCAATGTAA

Protein sequence : 
MSERRFRPVRNMSLGQRLRYELVRHTFSTRYRLQFYDALRFLLENGNPLGVALQMIAEVHTDFGKHWHPYGDLVDDCLES
LSDNGAGRTFENVLAAWGPLEEAALISAGMRSGKLPEALLQAGKLVEARRRILMLVSKMSLYPLLLFCLGGGMLVINGAY
LIPTLRKLSDPQDWSGALGFMHALANFTDRQGTAAVGAVAILIGLVLWSIPRWRGRLRRLADNMVPWSVYQDIQGAVFLM
NMAALLRANVQTLEALYILQPFSSPWLQERLDAIIAGVEQGDHLGKALRNSGYQFPSKEAANYLSLLTEGDGAPDIIGRY
GDRWLEQTLERVNKRVMVVMLFSLLLIFSFFLLILSTVMQIQDMTSDSM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3501 YP_001007662.1 type IV pilus integral membrane protein Virulence YAPI Protein 4e-162 100
pilR YP_001402684.1 type IV pilus biogenesis protein PilR Virulence YAPI Protein 2e-130 87
pilR CAF28491.1 putative integral inner membrane protein Virulence YAPI Protein 3e-131 86
pilR NP_458634.1 putative membrane protein Virulence SPI-7 Protein 1e-70 50
pilR NP_807845.1 hypothetical protein Virulence SPI-7 Protein 1e-70 50
pilR AAC98886.2 PilR Virulence SPI-7 Protein 1e-70 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE3501 YP_001007662.1 type IV pilus integral membrane protein VFG2314 Protein 2e-162 100