Gene Information

Name : YE3500 (YE3500)
Accession : YP_001007661.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : putative type IV prepilin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3810991 - 3811578 bp
Length : 588 bp
Strand : -
Note : Similar to Escherichia coli type IV prepilin PilS SWALL:O88170 (EMBL:AB007463) (204 aa) fasta scores: E(): 1.1e-37, 56.61 38d in 189 aa and to Salmonella typhimurium type IV prepilin PilS SWALL:O07377 (EMBL:AB027308) (204 aa) fasta scores: E(): 2e-37, 56.

DNA sequence : 
ATGTTATTTCATGCGGTAGCCAGAAAACGGCCCCATCGTGGTTGGGGCATCCTTGAGAGCGGCGGTGTGGCTCTGGTGGT
GATCATCGTTATTACGGTGGTGCTGGGGGGGCTTTATATGCTGTGGAATCGAAAGGATATTGCCTTGGAGTCAGCCAACG
TGCAGAGCATCATCACGTCCACGCAAGGGCTACTAAAAAGTCGTAACGGTTACAACTATACTAGTGGGATGGTCATGACC
GGCTTACTTATTCAGGTAGGTGGTGTACCGAAAAATATGATGACAAAAGGTAATGTTACCACTGGTACGGCTACCCTATG
GAATACATGGGGTGGGCAGGTAGTGGTGGCCCCTATAACTGCGAATGGTTTCAATCATGGCTTTACGGTGATTTACCCGA
AAGTTCCGCAATATGCGTGTATTGCTATAACCACTAGCCTCAGCACGGGCGGCAGTATCTCTGGTATTACCATCAACAGT
ACCGCTTATAGTGATGGCAATGTTACTGCTGAAAATGCGGGCACAGCCTGCGTGAAGGATACAGGCAGAAGCGGGATGAA
TACGCTGACCTTCACGGTTAATGGTTGA

Protein sequence : 
MLFHAVARKRPHRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLKSRNGYNYTSGMVMT
GLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANGFNHGFTVIYPKVPQYACIAITTSLSTGGSISGITINS
TAYSDGNVTAENAGTACVKDTGRSGMNTLTFTVNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3500 YP_001007661.1 putative type IV prepilin Virulence YAPI Protein 7e-66 100
pilS CAF28492.1 putative major pilin subunit Virulence YAPI Protein 4e-55 84
pilS YP_001402683.1 type IV pilus biogenesis protein Virulence YAPI Protein 9e-55 83
pilS AAC98887.1 PilS Virulence SPI-7 Protein 6e-26 50
pilS NP_807846.1 prepilin Virulence SPI-7 Protein 8e-26 50
pilS NP_458635.1 prepilin Virulence SPI-7 Protein 8e-26 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE3500 YP_001007661.1 putative type IV prepilin VFG2315 Protein 2e-66 100